Mytilus californianus (California mussel): 127737929
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Entry
127737929 CDS
T08804
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127737929
03041 Spliceosome [BR:
mcaf03041
]
127737929
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127737929
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127737929
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127737929
mRNA cycle factors
Common to processing body (P body) and stress granule
127737929
Spliceosome [BR:
mcaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127737929
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127737929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127737929
NCBI-ProteinID:
XP_052104844
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MSNAPNQNGQGLEQQFAGLGLGDNSRPYNNYNNAPKYWPNQANRFQGPPPNYKEQGQGFN
DSGSRYVPPHVRNAGQGPPPNVPPPQNDQKEGGNRGGYQQNYNRGGGGGGGGYAMNGGPP
QSYSQPNGLEQKDSLTTKNGMELETDMGNDRGGYSSYNRGGRGGYSAGYQGNQGGGYQGS
QGGYNQGGFQGNQAGYTNYNNRGGYQGNQGGGYGRGGGGDRMNRQGSAPPFSGGYAGGSS
RWDALKDDSRQPYNDNRGGYNTGFDGGRGGANGAGGYQNYNRRDMGRGGGQARDSGLQIN
NRWDNRTEYNNPEGGYPEATKDNWTVPLPRNDRLENELFGGNNSGINFDKYDDIPVEATG
ENVPKCVDTFEETTLGEIIRNNIVLTKYSKPTPVQKYSLPIVLNKRDLMACAQTGSGKTA
AFLVPILNRVYENGPAEQATQEGRQYGRRKQFPLALVLAPTRELASQIYDEARKFAYRSR
VRPCVVYGGADIGAQMRDLDKGCHLLVATPGRLVDMIERGKIGLDHCKFLVLDEADRMLD
MGFEPQIRRIVEKDTMPSCGIRQTLMFSATFPKEIQILARDFLENYIFLAVGRVGSTSEN
ITQKVVWVEEGEKRSFLLDLLNAAAGPDSLTLVFVETKKGADALEDFLIREGYPATSIHG
DRSQKEREEALASFRNGDRPIIVATAVAARGLDIPNVKHVVNFDLPSDIEEYVHRIGRTG
RVGNLGLATSFFNEKNKNIVRDLMDLLVESHQEVPSWLESMGYDARPSGTSRRGASKRFG
GAGFGSRDYRQQSKPKPQQNMGGYGNPMPAPVYNNYGGSYGGSYGGSYSNNSGPDWWGN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgctcccaatcaaaatggacagggtctagaacagcagtttgctggtctaggc
ttaggagacaacagtcgtccttacaacaactacaacaatgcaccgaaatattggcctaac
caagctaacagatttcagggaccacctcccaactacaaagaacaaggacaaggttttaac
gactctgggtcccgttatgtcccaccccatgtgagaaatgctggacaagggccaccaccc
aatgtcccacccccgcagaatgaccaaaaagagggtggaaaccgaggtggatatcagcag
aactacaaccgaggaggaggtggtggaggtggaggatatgctatgaatggaggacctcca
cagagctatagtcaaccaaatggacttgaacaaaaggacagtttaacaacaaaaaatgga
atggaactagaaacagacatgggaaatgatcgtggtggatatagttcctacaatcgtgga
ggaagaggtggttactcagcaggataccagggtaaccaaggtggtggataccagggcagt
caagggggttataaccaaggtggtttccaagggaaccaggcaggatacaccaactataac
aatcgtggaggttatcagggcaaccaaggaggaggatatggtcgtggaggtggtggtgat
agaatgaacagacagggcagtgcaccacctttctctggaggatatgcaggaggcagctcc
agatgggatgctctcaaagatgactctcgccaaccatacaatgacaaccgtggtggctac
aacactggctttgatggtggtcgtggtggagcaaatggagctggtggataccaaaactac
aatcgacgtgatatgggtagaggtggaggtcaggcccgtgacagtggcttgcagataaat
aatcgttgggacaatagaactgaatataacaatcctgaaggaggttaccctgaggccaca
aaggacaactggactgttcctcttccaagaaacgacagactagaaaatgaattgttcggt
ggtaataatagtggtataaactttgacaagtatgatgatattcctgtagaagccacagga
gaaaatgtaccaaaatgtgtagatacttttgaggaaacaactttgggagaaattattaga
aataatattgtactgaccaaatacagtaaacctacacctgtacagaaatattctttgcct
attgtactaaacaagagagatttaatggcttgtgcacaaacaggttctggaaagactgct
gcctttttagtaccaattttgaatcgtgtgtacgagaatggacctgctgaacaagctaca
caagagggaagacagtacggaagaaggaaacaattcccattagctttggttttggctcca
accagagagttggcctcacagatctatgatgaagctagaaagtttgcttatcgttcccga
gttcgtccctgtgtagtctatggaggtgccgatataggagcacagatgagagaccttgat
aaaggatgccatctccttgtggccacacctggtcgtcttgttgacatgattgaaagagga
aaaattggtcttgatcattgcaaatttttagttcttgatgaggctgataggatgttagac
atgggatttgaaccacagattagaagaattgttgagaaagataccatgccatcttgtggt
ataagacaaacgcttatgttcagtgctacattccccaaggaaattcagattctggcacga
gatttcttggaaaactacattttcttggctgttggcagagttggaagtaccagtgagaat
attacacagaaagttgtgtgggtagaagaaggggaaaagcgatctttcttgttggacttg
ttaaatgctgcagctggtccagattcattgacattagtttttgttgaaaccaagaaggga
gctgatgctctagaagatttcttaattcgtgaaggttacccagcaaccagtattcatgga
gatagatcacaaaaggaacgtgaagaagcattagctagcttcagaaatggtgacagacca
attattgtagccactgctgtggcagcaagaggattggatatcccaaatgtgaaacatgtg
gtgaactttgaccttccaagtgatattgaggaatatgttcacagaattggtagaactggc
agagtaggaaatctgggtttggcaacttctttcttcaatgaaaagaataagaacattgtt
cgtgatttaatggatctattagtagaatctcatcaggaagtgccatcatggttagaatcc
atgggatatgatgctagacctagtggaacatctagacgaggtgcatctaaaagatttggt
ggagctggctttgggtccagagattatcgtcaacaaagtaaaccaaagcctcaacagaac
atggggggatatggcaatcctatgcctgctccagtttacaataattatggtggatcttat
ggcggttcatatggtggaagttacagtaacaactctggtccagactggtggggaaactaa
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