Mytilus californianus (California mussel): 127737944
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Entry
127737944 CDS
T08804
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03030
DNA replication
mcaf03410
Base excision repair
mcaf03420
Nucleotide excision repair
mcaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127737944
03410 Base excision repair
127737944
03420 Nucleotide excision repair
127737944
03430 Mismatch repair
127737944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127737944
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127737944
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127737944
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127737944
DNA Replication Termination Factors
ELG1-RFC complex
127737944
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127737944
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127737944
Check point factors
HRAD17(Rad24)-RFC complex
127737944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_24
AAA_11
AAA_22
ResIII
AAA_16
AAA_30
Mg_chelatase
SLFN-g3_helicase
AAA_19
RuvB_N
DNAX_ATPase_lid
AAA_7
DUF815
AAA_18
AAA_5
Gp44_lid
bpMoxR
TIP49_C
Motif
Other DBs
NCBI-GeneID:
127737944
NCBI-ProteinID:
XP_052104870
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLTGKSGLTKTKDKPTSKEPTREKSKHVPWVEKYRPKCVDDVAYQDEVVAVLKKSLQ
NADLPNLLFYGPPGTGKTSTILAASRELFGDMYKDRVLELNASDERGIDVVREKVKKFAQ
LTASGIRPDGKPCPPFKIVILDEADSMTKPAQAALRRTMEKQSRTTRFCLICNYVSRIIE
PITSRCAKFRFKPLAEDILSKRLREICGKENIKCDDEAIHGLMYTSEGDLRKAITYLQSA
ARLKGEDEINKQDIYEIAGVIHDEVIDKLIEVCSTDSYEKLEQEIKVAMMEGHSGMQVIT
QLHDKLVEMESLTDKQKSVIMEKLAVVDKCLIDGADEYLQLMSLFTTMMQQICHGEK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcattcttaactggaaaatctggtttaaccaagacaaaagacaaaccaacttca
aaagaaccaacaagagaaaaaagtaaacatgttccatgggtggagaagtacagaccaaaa
tgtgttgatgatgtagcttatcaagatgaagtagtagctgtattaaagaaatctttacag
aatgcagatttaccaaatctgttgttttatggtccaccaggaacaggaaaaacatcaaca
attttagcagcttctagagagctgtttggggacatgtacaaagacagagttctggaacta
aatgcatctgatgagagaggaatcgatgtcgtcagggaaaaagtgaagaaatttgcacag
cttacagctagtggaataagacctgatggcaaaccatgtccaccttttaagatagttatt
cttgatgaagcagactccatgactaagccagctcaggcagctttaagaagaacaatggaa
aagcagtctagaaccaccagattctgtttgatttgtaactatgtcagtagaattatagaa
cctattacatctaggtgtgcaaagtttaggtttaaaccattagcagaagacatcttatcc
aaacggttacgggaaatttgtggaaaagagaatattaaatgtgatgatgaggcaatacat
ggtttaatgtatacgtctgagggagatctgagaaaagccatcacatatttacagagtgca
gcaagattaaaaggagaagatgaaattaataaacaagatatttatgaaattgctggtgtt
attcatgatgaagtaatagacaagttgatagaagtgtgcagtacagattcttatgaaaaa
ttggaacaagagataaaggtagcaatgatggaaggacactctggaatgcaggtgataaca
cagttacatgataaactggttgaaatggagtcactcacagacaaacagaaatctgtcata
atggaaaaactggctgttgtagacaaatgtttaattgatggtgctgatgaatatttacaa
ctgatgtctctatttacaactatgatgcaacagatatgtcatggagaaaagtga
DBGET
integrated database retrieval system
