Mytilus californianus (California mussel): 127738300
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Entry
127738300 CDS
T08804
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03020
RNA polymerase
mcaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127738300
09124 Replication and repair
03420 Nucleotide excision repair
127738300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127738300
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127738300
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127738300
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
127738300
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127738300
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127738300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
127738300
NCBI-ProteinID:
XP_052105463
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MFFHVSLEHEILLHPRYFGPNLLNIVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGLIQ
PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDVVIQQDDEIRVKIVGTRVDAKDIFAIGTLMDDYLGLCS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcatgtttctctggaacatgagatcctacttcatccacgatattttggtcct
aatttattgaacatagtaaaacagaaattgttcacagaagtggaaggaacatgtacagga
aagtatggctttgtaatagcagttactacaatagacaacataggagcaggcttaatacaa
cccagtagaggatttgttgtttatcctgtcaaatataaagctattgttttcagaccattc
aaaggagaggttttagatgctgtagttacccaagtaaacaaggttggtttgttcacagaa
ataggaccattgtcatgctttatatcaagacattcaattcctgccgacatggagtttgat
cccaattctaaccctccctgttataaaaccaaagatgaggatgttgttatacagcaagat
gatgaaatcagagtgaagattgtaggaacaagagtggatgctaaagatatttttgccatt
ggaacattaatggatgactacttaggtctgtgtagttga
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