Mytilus californianus (California mussel): 127738309
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Entry
127738309 CDS
T08804
Name
(RefSeq) DDB1- and CUL4-associated factor 5-like
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127738309
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127738309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
127738309
NCBI-ProteinID:
XP_052105470
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAFRSFRQNCLSSVCDPVGFIGRREIGNTQPNTSSDKFMRHRTSLAKNLYKRELKAHYGC
VNAIEFSHKGGQFMSSGGDDRRVLLWNVEKALSDIGSPKIMKGEHNSNIFCIAFDRDNKK
IFSGGNDEQVLVHDIESGATLEVFMHDDAIYGLTSDPNNVNVFASACDDGRILVFDIREP
ASTDPFCLANYTSSMHAVAYNPVEPRLLATANAREGIGLWDIRKPKSCLLRYGSGLVQQS
CMSVCVSKMGDRLLALRRRLPPVLYDIKSPFPLCEFDHAGYYNSCTMKSCSFAGDRDQYV
LSGSDDCNLYMWKIPDDLSKRQFVNDAHMVLHGHRSIVNQVRFNAANHLILSSGVEKSIK
VWSPFPVPTSEGGIDSNSVKKNAARPAYSHEEYINLVLQTGHVMTHDYSSQSVEEDPRML
AFFDSLVQRELEGFSSSEDFASSDEELLDRIENIHDSDFSDSDSHHSRHATQNRTSSNHN
QENGQEDSTVNSFSVTFASAANSRSLDGNAVSSGNMEHYSEISNSSDNDTDSENNSLQGG
KTIEKLIKERCKQIKLNGKTKRKRPLVTYSSDSSDSEKDDNTASDSSTHREQVQGHPLNI
LSACKQRNHLQLKRLKLLRDSALNSDSDLDDAGSLELNEKNSIHKNGACENLTENSKCEE
NNKCKNTEEDMGPYLYEAENQPSCSKTLAGPSSDSFPIVENHEGPQNSESEVNSQQKWSE
FKRLKTKATSRKYRSHSKAEDN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcattcagaagttttcggcaaaactgtttatcttcagtatgtgacccggttggcttt
attggaagacgagaaattggtaacactcaaccaaatacttcatcagacaaatttatgaga
cacagaaccagcttagcaaaaaacttgtacaagagagaacttaaagcgcattatggatgt
gttaatgcaatagagttctcgcacaaaggaggacaatttatgtcttcaggtggtgatgac
agaagagtgttattgtggaacgttgagaaagccctgtcagatataggttctcctaagata
atgaaaggagaacataatagtaacatcttttgtattgcttttgatcgtgacaacaagaag
atattttctggtggaaatgatgaacaagttcttgtgcatgacattgaaagtggtgccaca
ttagaagtgttcatgcatgatgatgcaatatatggattgacatcagaccctaacaatgtc
aatgtgtttgccagtgcctgtgatgatggcagaattttggtattcgatataagagaacca
gctagtacagatccattttgtttggcaaattacacttcatctatgcatgcagtggcatat
aacccagtagaaccacgtctactggcaacagctaatgctagagagggcattggattatgg
gatatcaggaaacctaaaagttgtttattgagatatggtagtggtttagtacaacaaagt
tgtatgagtgtctgtgtcagtaagatgggagacagactattagcactacgaagacgtcta
cctccagttttatatgacattaaaagtccctttccattatgtgaattcgaccatgctggg
tattacaactcttgtacaatgaaaagctgctcatttgctggagatagagatcagtatgta
ttgtctggatctgatgactgtaatctatacatgtggaaaatacctgatgatttatcaaaa
agacagtttgtaaatgatgcacacatggtattacatggacatagatctattgtaaatcaa
gtgagatttaatgctgccaatcatctaatcttatcttctggtgttgaaaaatctattaag
gtatggagtccatttccagttcctacgtcagaaggaggaatagattccaattctgtgaag
aagaatgcagctagacctgcttactcacatgaggaatatatcaacctggtgttacagact
ggtcatgtgatgacacatgattattccagtcagtcagtagaggaagatcctcgaatgcta
gctttctttgattcattagtacaaagagaactggaggggttcagttccagtgaagacttt
gctagtagtgatgaagaattattagatagaattgaaaatatacatgattctgatttctca
gattcagatagtcatcattcaaggcatgctacacaaaacagaacttcaagcaatcataac
caagaaaacggtcaggaggattctacggttaattctttttctgtgacctttgctagtgct
gctaattccaggtcccttgatggtaatgctgtatcttcaggtaatatggaacattacagt
gagatttctaatagttcggacaatgatacagactcggaaaataattctcttcaaggtggg
aagactatagaaaagctgataaaagaaagatgcaagcaaataaaactaaatggaaagact
aaaagaaaaagaccattggtcacctacagttcagattctagtgacagtgaaaaagacgac
aacacagcaagtgacagttctactcatagggaacaagttcaaggccatccactaaatatt
ctgtctgcttgtaaacagagaaatcacttacagttgaaaagattaaaacttttgagagat
agtgctttaaacagtgattcagatttagacgatgctggaagtttggaactaaacgagaag
aacagtattcataaaaatggagcatgtgaaaatttaactgaaaattcaaaatgtgaagaa
aataataaatgtaaaaacactgaagaagatatgggaccatacttatatgaagctgaaaat
cagccatcttgttcaaaaacattggctggcccttcttctgacagttttccaattgtagaa
aatcatgaaggtccccaaaatagtgaatcagaagttaatagccagcaaaaatggtcagaa
ttcaaaagattaaaaacaaaagctacatcaagaaagtaccgaagccatagtaaagctgaa
gataattaa
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