Mytilus californianus (California mussel): 127738389
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Entry
127738389 CDS
T08804
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcaf01002
]
127738389
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127738389
Enzymes [BR:
mcaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127738389
Peptidases and inhibitors [BR:
mcaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127738389
Ubiquitin system [BR:
mcaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127738389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
127738389
NCBI-ProteinID:
XP_052105580
LinkDB
All DBs
Position
Unknown
AA seq
2573 aa
AA seq
DB search
MTIVMRGGQAGGDSPQENVQNPPESTQQPQQQQPLPPQQTPATSTTQPPAESENGQGDGS
VEMTDDQEPEFPVQELARLDEMINRPRWVVPVLPKGELEILLEAATKLCKDGLDTRSEAC
QRFFREGLTVSFTKIMTDEAVSGWKYEIHRYILKNAEKLIELCVAKLAEDWYPLLELLAM
VLNPHCKFHTYNGTRQSESVQAGVTLPDDALFARPPDPRTPRGWLVDLVNRFGELKGFQI
LLKRFQDGPQMSVPLVAALIKPFGQCNEVLTPHTVEKYMMPIVEIVPKFLDSLTDEELKK
ETKTEAKNDALSSIIKALKQLVSRLPDQEETIKNLEIFRLKMILRLLQISSFNGKMNALN
EVNKVISMISNVSSRHSSMDEDEWLTAEKMADWIQNNQVLTIVLRDSLHQPQYVEKLEKI
LRFMIKEKALTSEDLDKLWEAQSGKHDAIVKNVHDLLAKLAWDFSPEQLDHLFECFQGSW
TQASKKQREKLLELIRRLAEDDKEGVMAHKVLGLLWNLAHSEDVPTDIMDQALTAHIKIL
DYSCSQDRDQQKMTWIGKFVDELKNDKWVLPALKQIREICQLFPEAPQNFPHAPPRTPHV
YYRNNVINQLQSTHSIVMLVAKNLSEYMEKSRVFAKEHPDLDPATILPDGRFNHVVQIQE
RLKFMRFLLKDGQLWLCESQARQIWQCLAENAIYGTDRESCFKWFAKLMGEEPDLDPEIT
RDFFEQNILQLDPSLLTENGMNCFERFFKHVNLKENKLIAKRRGGHMIDDLELIGLDYLW
RAVLLSPDDVANKAITLLKDIFTNLGPRLQQNQVDIHDDFIQSCVDRLKALYDTVSVLEK
DKDSTNRVMQETSRMVRVLTVLKEYVAECDEAYTDERSILPLSRACRGKLVTLIVRFPSQ
GRQMEDIEIWSHSNDTIGQVRRQILYKLKLSSNIKVDLYVNNELLDPAEDKRLILQVPLR
EKALISAKLVQVGNNMPSSPDSSSDSSAGSPHHTFDGPNIEAESCLPGVIMANTAKYAKF
MFQLSDLGCSLQVPKLRDTARTLLKLMPADSHTVDRLCNICNENTRSDTTLSQQLEIMFF
NSSPTEALYNIEVAYSLLMPANDPMSEDAFKFQYNYVKSGGVQLALNMLTKNNFLPTADL
PTRRSAYVTVMKICKIMLTTVLNAKLQVVIDACNADPQSPNVTQQEHSHAVLIQQALQFI
PNQQSEIMTKNVAMRLGQHLTDQASKVIPDLSVIKAVQKIAWSSSSCSLHLVHASNEDIH
KAHEKPKDHLEVEDLVVAKESLEVLTICLCLCPPALEALNKDKSWQVFIKDLLLICKHRS
VRISATDQFYLMATRCCGGQRPVLFFITLLFCELNETVREYAKQANEYFNLLWKLLNYAC
STDIRLPNADKLLHNEILWLKKLREQVLNTGEVEVEDALLEGHLGITRELLAFQSPEKRY
HIGSEKGGSNLIKELIEDFLFPASKIVHQSRKVNGEFPTEQANPVCTTPLTITAAFDLLV
ALCTQCVPNLKCVALMLMEMFYNNDASLTEWEYLPPVGPRPHKGFVGLKNAGATCYMNSV
IQQLFMIDNIRSDILAIDGAADEACVEEDYVDEKVESETNVDMGDEERKDEEKPVSSKDD
ERKEYNMGVLKQIQLIFGHLACSKLQFYVPRGFWKHFKLSDEPVNLREQHDALEFFNSLV
DSADEALKVLNQPQILSKVLGGSFADQKICKDCPHRYQREESFTALNIDIRNHHNLLESL
EQYVKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPQVLAIQLKRFDYDWERECAIKFND
YFEFPREFDIDPYTVQGMAKIEGEIIDIDESKPQSTKYKLIGVVVHSGQASGGHYYSYIL
HRGEDNTAKWYKFDDGDVSECKMDDDEELKNQCFGGEYLGEVFDHMLKRMAYRKQKRWWN
AYILFYERVDEVDNEKHIYKTLQDLTIVNKPYQVTMPTVIEKCVRKRNIMFMHEKSQFCV
EYFHFMKKLLNCNPIYTHCPQDKLSNDAEVLAMISTELASKFLFNVGFRTKKNIRGPASE
WYETLSSHLRPSKKVRSWFANNVLFAHPNRFAEYLLECPTSEVRSAFSKIIVSLAHFSVR
DGPSPPPLVHGLIAPGQTADPNMTLSDHLLLAVLQLLKKEVSEHGRHLQQYFHLFLMYAS
LGPDEKLQLLKLNVPAMFMLVALDEGPGPPIKYQYAELNKLYSVVSILVRCCDVSTRCLS
YAESSSKMNPYSDGPPKPNPFGDPSLPTPLMPIQQQVIEPMYGRTSYVKKLIEDCNSSDD
TAKLLKFCSWENPHFSSTVLGELLWQVAYSYTYELRPYLDLLLQMLLLEDTWQNHRIHNA
LKGIDEKDGLFDTIQRAKNHYQKRAYQCIKMMVSLFSVCRPAKEMLQSNGDLKRKWTWAV
EWLNDELERRPYPGNTQYTYNNWSPPAQSNETSNGYFLERSNSAKITLNKAYDLLPEEEP
EDSELTDEHESPHPEEGVQTYPPRPAGSSPQPIEKEKGKEKEKEEKESDKEKEKQENQEV
PPKPHVQNNQVNTSQSQQPIPPSNQINNQLNNQQPDTGEEEGSSNSNNKTSVE
NT seq
7722 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtgatgagaggaggccaggctggaggagactctcctcaagaaaatgttcag
aatcctccagagtcaacacagcagcctcaacagcaacagccactaccaccacaacagact
cctgctacttcaacgacacaacccccagcagaatcagaaaatggacaaggtgatgggtca
gttgaaatgacagatgaccaagaacctgaatttccagtgcaggagttggccaggctggat
gaaatgatcaatcgtccaagatgggtagtaccagtattgccaaaaggagaacttgaaatt
ttgcttgaagcagctactaaactctgtaaagatggattggacaccagaagcgaagcttgc
caaagatttttcagagaaggtcttacagtatcatttaccaagataatgacagatgaagct
gtcagtggatggaaatatgaaatccatagatacattttaaagaatgcagaaaagttaata
gaactgtgtgtagccaagctggctgaggactggtaccctttactagaactattagctatg
gtacttaatccgcactgcaaattccacacatataatggaacgagacagtcagaatctgta
caagctggagttactcttcctgatgatgctttgtttgcaaggcctcctgatccaaggaca
ccaaggggttggttagttgatctggtaaaccgatttggagaactgaaaggttttcagata
ctgttgaaaagatttcaagatggtccacaaatgtctgtcccacttgtagctgctcttata
aaaccctttggacagtgtaatgaggtactgacgccacatacagtagagaaatatatgatg
ccaattgttgaaatagtgcccaagtttttagattctttgactgatgaagaactaaagaaa
gaaaccaaaacagaggccaagaatgatgctttgtcctcaatcattaaagctctgaagcaa
cttgtctccagacttccagaccaagaagagaccattaaaaatttggaaatatttagacta
aagatgattcttagattgctgcagatttcctcattcaatggaaagatgaatgctttgaat
gaagttaacaaagtaatatcaatgatatccaatgtatcaagtcgacactcatctatggat
gaagatgaatggctgacagcagaaaaaatggcagactggattcaaaataatcaggttttg
acaattgtactaagagacagcttacatcagccacaatatgttgaaaagctggagaaaata
ctcagatttatgattaaggaaaaagctttaacatctgaagacttggacaagctttgggaa
gctcagtcaggaaaacatgatgcaatagtgaagaatgttcatgacctgttggccaaactt
gcctgggacttctcgccagaacaattagaccatttgtttgaatgttttcaaggaagctgg
acacaggcctcaaagaaacagagggaaaagttattagaattaatcagacgactagcagag
gatgataaggagggtgtgatggcacataaagtattaggattgttatggaaccttgcccat
agtgaagatgtacctacagatatcatggatcaggctctcacagcacatatcaaaatattg
gattacagctgttcacaggatagagaccaacagaagatgacatggataggaaagtttgta
gatgagttgaaaaacgataaatgggtactgcctgctttaaaacagattagagaaatatgc
caactgtttcctgaggctccacagaacttccctcatgcaccaccaagaacacctcatgtt
tactacaggaataatgttatcaaccagttacagtctacacattctattgttatgttggtg
gccaagaatctgtcagaatatatggagaagtcaagagtatttgctaaagagcatccagat
ttggatccagccactattttacctgatggcagatttaatcatgtggttcagatacaagaa
agattaaagtttatgaggtttcttctaaaagatggacagttatggttgtgtgaatctcaa
gccagacagatttggcaatgtttagctgagaatgctatatatggaactgacagggagtct
tgttttaaatggtttgctaagttaatgggagaagaaccagaccttgatccagaaataaca
agagatttctttgagcaaaatatcttacaattggatcccagtcttctgacagaaaatggc
atgaactgttttgaaagatttttcaaacatgtcaatttgaaagagaacaaattaatagcc
aagagaagaggtggccatatgattgatgatttagaattaatagggttagactatttatgg
cgggctgtgttacttagtccagatgatgttgcaaataaagcgataacattattaaaagac
atttttacaaacttgggtccacggttacaacagaaccaagtggatatacatgatgacttt
atacagtcgtgtgtagataggttaaaagctttatatgatactgtgtctgtgttagagaag
gacaaagacagtacaaatagagtgatgcaggagacatccaggatggttagagtgctgaca
gtgttgaaggaatatgtagctgagtgtgacgaggcttatactgatgagcgatcaattcta
cctcttagcagggcatgtagaggaaaattagtgactttaattgttcgatttcctagtcaa
ggtcgtcagatggaagacattgaaatttggtctcattcaaatgatacaattggacaagtt
agaagacagattttatataaacttaaattaagcagtaatataaaagtggatttatatgtg
aataatgaactattagatccagcagaggataaaagattaattttacaagtgccattgaga
gaaaaagctttgatatcagcaaagttagtacaagtaggaaataacatgccatctagtcca
gatagtagttctgatagctcagctgggtcacctcatcatacttttgatggtcctaatata
gaggctgaaagttgtttacctggtgtgataatggcgaatacagctaagtatgccaagttt
atgttccagttatcagatttaggttgttcacttcaagttccaaaacttagggatactgcc
agaactcttcttaaactaatgcctgcagattctcatactgtagacagattgtgtaatata
tgtaatgagaacactaggtcagacacaactctttctcaacaattagaaataatgttcttc
aattcatcacctacagaagccctgtataatattgaggttgcttacagtctgttaatgcct
gcaaatgatcctatgtctgaagacgctttcaaatttcagtataattatgtaaagagtgga
ggtgtacagttggcacttaacatgttaaccaagaataacttcttacctactgcagatctg
ccaacacgcaggtctgcttatgtaactgtgatgaagatctgtaaaataatgttaactacc
gtcctcaatgccaagcttcaagtggtgatagatgcttgtaatgctgatcctcagtcacct
aatgtaactcagcaggaacacagtcatgctgtattaatacaacaggcattacagttcata
cctaaccaacagtcagaaatcatgacaaagaatgtagccatgagactaggtcaacattta
acagatcaggcctctaaagtaattccagatttgtcagttataaaagcagtacagaaaata
gcttggtcctccagtagttgttcattacatttggttcatgcatctaatgaggatattcat
aaggctcacgagaagccaaaagaccatttggaagtagaagatttagtggttgctaaggaa
tcattagaagttctgacaatctgtctctgtctatgtcctcctgctctagaagctctcaat
aaagacaaatcatggcaggtcttcatcaaggatttgttattgatatgtaaacacagatct
gtacgaatatctgcaactgatcaattttatctaatggcaaccagatgttgtggtggtcag
agacctgttttgttttttattactttgttgttttgtgagttaaatgaaactgtgagagag
tatgctaaacaagcaaatgaatacttcaatttgttatggaagttgttaaattatgcatgt
agtacagatataagattacctaatgcagataaactgttacataatgaaattttgtggttg
aaaaaattgagggaacaagtattaaatacaggagaagttgaagttgaagatgctctatta
gaggggcatcttggcatcacaagagagctgttagcattccagtcaccagaaaagaggtac
cacattggttctgaaaaaggaggatcaaatctcataaaggaactaattgaagacttcctg
tttcctgcatcaaagatagtccatcaaagtagaaaagtaaatggagagtttcccacagaa
caagctaatcctgtgtgtaccactccactaacaattacggcagcatttgacctgttggtg
gctttgtgtacacaatgtgttcctaatcttaaatgcgtagctcttatgttgatggagatg
ttctacaacaatgatgcttcattaactgaatgggaatacttgccaccagttggtcctcgt
cctcataaagggtttgtaggtctgaagaatgcaggtgccacatgttatatgaactctgtc
attcaacagctgtttatgatagacaacatcagatcagatatattagctattgatggagct
gctgatgaagcctgtgtagaggaagattatgttgatgaaaaagtagagagtgaaacaaat
gtggatatgggtgacgaagaaaggaaagatgaagaaaaaccagtgagcagtaaggatgat
gagaggaaagaatacaacatgggtgtactcaaacaaatacagttgatatttggccattta
gcttgtagcaagctgcaattttatgtcccaaggggattctggaaacatttcaagttgtca
gatgaaccagtgaatttgagagaacaacatgatgccttagagttttttaatagtttagta
gacagtgcagatgaggctttaaaagtactcaatcaaccacaaattttatccaaggtctta
ggtgggtcattcgctgaccaaaaaatatgcaaggactgtccccatcgttaccaaagagaa
gagtctttcacggcattgaacattgatattcgaaatcatcataatttattagaatcttta
gaacaatacgttaaaggagatttattagaaggtgctaacgcatatcgttgtgaaaagtgt
gataaaaaggttgatactgttaaaagattgttaataaagaagttaccacaagtgttggca
atacagctgaagcgatttgattatgactgggaaagagaatgtgcaataaagttcaatgat
tactttgagtttccacgagagtttgacatagatccttatacagtacaaggaatggcaaaa
attgaaggtgaaataattgatatagatgaatctaagcctcagagtaccaaatacaagctt
attggagttgttgttcatagtggacaagccagtggtggtcactactattcgtatatatta
catagaggtgaagataatactgctaaatggtacaagtttgatgatggggatgtgtcagaa
tgtaaaatggatgatgatgaggaactgaaaaatcaatgttttggaggggaatatttagga
gaggtgtttgatcacatgctaaaaagaatggcttatagaaaacagaaaagatggtggaat
gcctacatcctgttttatgaaagggtagatgaagtggataatgagaaacacatctacaag
acactccaagacttaactattgtaaataaaccttaccaagtgaccatgccaactgtgata
gagaagtgtgttaggaaacgtaacattatgtttatgcatgagaagagtcagttctgtgtg
gaatatttccattttatgaagaaactgcttaattgtaatcccatctatactcattgtcca
caagataaattgtccaatgatgcagaagtacttgccatgattagcacagagctggcctct
aagtttttgtttaatgttggatttagaacaaagaagaatatacggggaccagcaagtgaa
tggtatgaaactctaagtagccatctacgacccagtaagaaagttcgcagctggtttgca
aataatgtattatttgcccatcctaacagatttgctgagtatttactagagtgtcctacc
tcagaggtcagaagtgctttcagtaaaataattgtgagcttagctcatttctctgttaga
gatggtcctagtcccccaccattagttcatggcttaattgccccaggtcagactgcagat
cccaacatgacattgagtgaccatctacttctagcagtactacagctgttaaagaaagaa
gtttcagaacatggaaggcatttacaacagtatttccacttgttcctaatgtatgctagt
ctgggacctgatgagaaattacagctgttaaagttaaatgttccagcaatgtttatgtta
gtagccttagatgagggaccaggtccaccaatcaaataccagtatgctgaactgaataaa
ttgtactcggttgtgtctatactggtcagatgctgtgatgtatctacccgttgtctttct
tatgctgagtcatcatccaagatgaatccttacagtgatggaccacccaagccgaaccct
tttggagacccttcattgccaactccattgatgccaattcagcaacaagtaatagaacca
atgtatggtagaactagttatgtaaagaagttaatagaggattgtaatagttctgatgat
actgccaagttactcaagttctgcagctgggagaatcctcacttctcatctactgttctt
ggggaacttttatggcaggttgcctactcctacacctatgaactccgaccttaccttgac
ctgttattacagatgttgttattggaagacacatggcagaatcatagaatacataatgca
ttaaaaggtattgatgaaaaagatgggttatttgatacaatacagagagctaaaaaccat
taccagaaaagggcataccagtgtattaaaatgatggtgtcattattttctgtatgtcgt
ccagctaaagaaatgctacaaagcaatggtgacttaaaaagaaaatggacatgggcagtt
gagtggctgaatgatgaattagaaaggagaccatatccaggcaatactcagtatacctac
aacaattggtcaccaccagctcagtccaatgaaacttctaatggctatttcttagaaaga
tctaatagtgccaagataacactgaacaaagcatatgacttgctaccagaagaggaacca
gaagattctgagctaacagatgaacatgaaagtcctcatcctgaagagggtgtacagacc
tatcctccacgcccagccggaagctcccctcagccaattgagaaggaaaagggaaaggag
aaggagaaggaagagaaagaatcagataaggaaaaggagaaacaagaaaatcaagaggtt
ccacctaaacctcatgttcagaacaatcaggtcaatacctcccagtcacagcaaccaatt
cctcctagtaatcaaattaacaaccaactgaacaaccagcaaccagatacaggggaggag
gagggttctagtaacagcaataacaaaacttctgtggaatga
DBGET
integrated database retrieval system
