Mytilus californianus (California mussel): 127738976
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Entry
127738976 CDS
T08804
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127738976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127738976
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127738976
U7-dependent histone pre-mRNA processing factors
127738976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
127738976
NCBI-ProteinID:
XP_052106435
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MTSIIRLQPLSGAHDESPPCYILQVDEFHFLLDCGWDEDFNMDFIKQLKRHLHQIDAVLL
SYPDHAHLGALPYMVGKAGLSCPIYATVPVYKMGQMFMYDLYQSRHNTTDFEIFTLDDVD
HAFDKIIQLKYSQTVHLKGKGHGIQITPLPAGHMIGGSIWRIVKDGEEEIIYAIDYNHKK
ERHLNGCVLDTITRSSVLITDAFNATYIQSRRRLRDEQLMTTILQTMRNDGNVLVAVDTA
GRMLELVQLLDQMWRTTESGLSPYSLALLNNVSFNVVEFAKSQVEWMSDKILRSFEENRN
NPYNLKHVRLCHNLAELAKIPEPKVVLASVPDLQCGFSRDLFLAWCGSARNSIILTNRTS
PGTLARYLIENPQNRTVTMEIRRRVKLEGAELDEFMKKKQDKENEEARKKAQERRELEDE
SSDESEAEMDIDVYSTVGGQKAKHDLMMKSEGKSRTGFFKHAKKAYPMFPYTEEKVKWDE
YGEIIRPEDYTILEVAPADEETTAEKKVKKEDESMIDLSEVPTKCVAATVTLDINANIQY
IDFEGRSDGESMKKIISQIRPKQLILVRGTKDATDSMAEYCGRLDGVKILTPNVGEMVDA
TRESHIYQLRLRDYVVSSLDFAKAKEIELAWVDGLVELKKEKRDTKAMYEAEDGEIDDED
KKDDEDDDDSADLIPTLEALPDQVIQGHKAVFINEPKLADFKRVLQLEGFQAEFAGGVLI
VNDTVAVRRYEAGRMQLEGAMCDDYFKIRDLLYNQYAII
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattattagactgcagccactgtcaggggcacatgatgaatctcctccttgt
tacattctgcaagtggatgaattccatttccttcttgattgtggctgggatgaagacttt
aatatggattttataaaacagttaaaaagacacttacatcagattgatgcagtgttactg
agttacccagaccacgctcaccttggtgcattaccttacatggtaggaaaggcaggacta
agttgtccaatatatgcaacagttcctgtatataaaatgggacaaatgtttatgtatgat
ctctatcagtcacgtcacaatactacagattttgagattttcacattagatgatgttgac
catgcctttgataaaatcatacaactcaaatattcacaaacagttcatttaaaaggtaaa
ggtcatggtatacagatcacgccacttcctgcaggtcacatgattggtggtagtatttgg
agaatcgttaaggatggcgaggaagagattatttatgccatagattacaatcataaaaaa
gaaagacatttaaatggttgtgtattagatacaataactagatcatcagtgctaatcaca
gatgctttcaatgctacatatatacagtctcgaagaagactcagggatgaacagttaatg
actaccattcttcagacaatgagaaatgatggtaatgttttggttgctgtggatacagct
ggcagaatgcttgaattggttcagttattggatcaaatgtggagaacaacagagtcaggt
ttatctccatattctctagccttattaaataatgtcagctttaatgttgtggagtttgct
aaatcacaggttgaatggatgagtgacaaaattttaagatcatttgaagaaaacagaaat
aacccatataatcttaaacatgtcagattgtgtcataaccttgctgaactagccaagatt
cctgaacctaaggttgtgctagccagtgtgcctgatttgcaatgtgggttttcaagagat
ctattcttagcatggtgtggcagtgccagaaacagcattatattgaccaatcgaacatca
cctggaacattagcaagatacctcatagagaatcctcaaaacagaactgttaccatggaa
ataagaagaagagtaaagttggaaggagcagaactagatgaatttatgaagaagaaacaa
gacaaagaaaatgaagaagcaagaaaaaaggcccaagaaaggagagagttagaagatgaa
tcaagtgatgagagcgaagctgaaatggacattgatgtatattccacagtaggaggacaa
aaggccaaacacgatctcatgatgaaaagtgaaggtaaatcaagaactggttttttcaag
catgctaagaaagcttatccaatgtttccatataccgaggagaaagtcaaatgggatgag
tacggtgaaattatcagaccagaagattacaccattttagaagtagctcctgcagatgaa
gaaacaacggctgagaagaaagtaaagaaagaagatgagtcaatgatagatctgtctgaa
gtacctacaaagtgtgtagcggccactgttactttggacatcaatgctaacatccagtac
atagactttgaaggaagatctgatggagaatcaatgaagaaaattatatcacagattaga
cctaaacaattgatcttggtacgtggaacaaaagatgctaccgattctatggcagaatat
tgtggtcgtttagatggggtaaagatattaactccaaatgttggtgaaatggtagatgct
accagagaaagtcacatttatcagttacgactaagagactatgtggtcagttcattagat
tttgcaaaggccaaagaaattgaattggcatgggttgatggacttgtagaactgaagaaa
gagaaaagagatactaaagccatgtatgaagcagaagatggggagattgatgatgaagat
aaaaaggatgatgaagatgatgatgattcagcagatttgattcctacattggaggccttg
cctgatcaagttattcagggtcacaaagctgtttttatcaatgaaccaaagctagcagac
ttcaagcgtgtattacaattagaaggtttccaggcagagtttgcaggaggtgtacttatt
gttaatgatacagtagcagttagaaggtatgaagcaggaagaatgcagctagaaggtgcc
atgtgtgatgattatttcaaaatcagagaccttttatataatcaatatgctatcatttga
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integrated database retrieval system
