Mytilus californianus (California mussel): 127739436
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Entry
127739436 CDS
T08804
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127739436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcaf03009
]
127739436
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127739436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_22
AAA_16
TIP49
AAA_14
AAA_5
AAA_2
nSTAND3
AAA_28
NPHP3_N
AAA_33
RNA_helicase
Mg_chelatase
AAA_25
Rad17
ABC_tran
AAA_18
IstB_IS21
AAA_17
AAA_3
NACHT
TsaE
Vps4_C
NB-ARC
nSTAND_NTPase5
AAA_7
ATPase
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
127739436
NCBI-ProteinID:
XP_052107162
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSSYISDPRLIPRIREFLQSKKSGTFTSVVYLSEELQRKYSEYARRKKNVFVKLVGKAYG
IILQEEKDRGQMNHIDDLETKYLKKRQKKNDIEAIDSESDSASFSSDNSSYVQYEDKNSI
NNMMTNMYKKTSTPNRTADHNQKSTTKLFLIDKTGDRPEHLQSTSNNSTKNSDILLDNLG
EKTDSKSDVVVIGDDGDFCDDSVDLAQEPDRQSRPGSVVSVDLAQESDRQSRPSSIVNES
IGNKRSLKKSSATPKKKRKRQDNEEKEKKGPDVQKSTVTFADIGGNDDKLVEICKLLVHM
RHPEIYQQLGVTPPRGFLLHGPPGCGKTLLAHAIAGELSLSFIKIAATEIVSGVSGDSEE
KIRDLFDSAVAAAPCVLFIDEIDAITPKRETASKDMERRIVAQLLSCMDDLSSKTDLHVL
VIGATNRPDSLDPALRRAGRFDKEICLGIPDESSRERILRVLCRNLKLVENFDYKFLARN
TPGYVGADLTSLTREAAMVAVNRVFSDLQKSLLTNPVELKTDSAISVVPVISTDQTGGDT
VNSTVNGKSASDHRVSDTPEDMETETSSICIEDKAKDVNFKSLTLIDALSWLKEFPPLTN
EQLQTLNINLQDFEATLKHVQPSAKREGFATIPDVTWDDIGALHAVREDLQLAILAPVRH
PEAFKDLGLSKAQGILLAGPPGCGKTLLAKAVANESGINFISVKGPELLNMYVGESERAV
RQVFQRARNSSPCVIFFDELDALCPRRSDSGEGGSSVRVVNQLLTEMDGLEERKSVFIMG
ATNRPDIIDPAILRPGRLDKTLYVGLPCPDDRLDILRTITKNGTRPKLSTDVDLESLAKD
ERCNCFTGADLAALVREASMSALKVMISSQDTSIIEVNKEHFNTAFTRVRPSVSQKEQLK
YAKLKEQLQNG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttatatatcagatccacgtttgattccaaggatacgcgaatttcttcagtca
aagaaatcaggaacatttacaagtgttgtatatctttcagaggaactacagagaaaatac
agcgaatatgccagaagaaaaaagaatgtatttgtgaaattggtaggcaaagcctatggt
ataatattgcaagaagagaaagacagaggtcaaatgaatcatattgatgatcttgaaaca
aaatacctgaaaaagagacagaagaagaacgacattgaggctatagattctgagagtgat
tcagccagtttttcctccgataacagctcatatgtacagtatgaggataagaactctatt
aataatatgatgacaaatatgtataagaaaacatcaacacctaacagaacagctgatcat
aaccagaaatctacaactaaactgttccttatagacaaaacaggagacaggccagaacat
ttacaaagtacatctaataactcaactaagaattctgacatattgcttgataatttggga
gaaaaaacagacagtaaatcagatgttgttgtcattggtgacgatggtgacttttgtgac
gatagtgtagatctagcacaggaaccagacagacagagtagaccaggctctgtagttagt
gtagatttagcacaggaatctgacagacagagtagacccagctctattgttaatgaatcc
attggaaacaaaagatcattaaagaaatcaagtgccacacccaaaaagaaaaggaaaaga
caggacaatgaagaaaaggagaaaaaaggtccagatgtacagaaatctacagttacattt
gctgatattggaggcaatgatgacaaacttgtggaaatatgtaaattgttggtacacatg
agacacccagagatatatcaacaactgggagtaactccacctcgtggatttttattacat
ggtcctccaggatgtggtaaaacactcttagctcatgccattgctggggaattgagtctt
tcatttatcaagatagcagcaacagaaatagtgtctggagtatctggtgattctgaagag
aaaatacgagatttatttgatagtgcagtggctgctgcaccatgtgtgttgtttatagat
gagatagatgccataacaccaaagagagaaactgcttctaaagacatggaaagaaggatt
gtggctcagttactgtcttgtatggatgatttgagttctaagacagacttgcatgtatta
gtgataggagctactaacagacctgattcattagatcctgctttacgaagagctgggaga
tttgataaagaaatctgtctcggtattcctgatgaatcatctagagaaaggattttaaga
gtattgtgcagaaatttaaaactggtagaaaattttgattataaatttctagctagaaat
actccaggttatgttggagctgacttgacatctctgacaagggaagctgccatggttgct
gttaatagggtgttcagtgacttgcagaaaagcctattaacaaatcctgtcgaacttaaa
acagattcagctatatcagtagttcctgttatctcaactgaccaaactggtggtgataca
gtcaatagtacagttaatggtaaatcagcaagtgaccatagggtatctgatactcctgaa
gatatggaaacagaaacaagcagcatttgtatagaagataaagctaaagatgtaaatttc
aagtcattaacacttatagatgcattatcatggcttaaagaattcccaccattaaccaat
gaacagttacagactttgaatataaatctgcaagattttgaggcaactttaaaacatgtg
cagccttctgccaaaagagaaggatttgctacaataccagatgttacatgggatgatata
ggtgctcttcatgctgttagagaagatctacaattagctattttggcaccagttagacat
ccagaagcatttaaagatctaggtttatctaaagctcagggaatactgttggcaggacca
cctggatgtggaaaaactttactggcaaaggcagtagcaaatgaatctggaatcaacttt
atatcagtgaagggacctgagttattaaacatgtatgtaggagaaagtgagagagcagtc
agacaggtattccagagggccaggaattcatcaccatgtgtcatattctttgatgaatta
gatgctttatgtccaagaaggtctgactctggagagggtggatcaagtgttagagttgta
aaccagctgttaacagaaatggatggattagaggagaggaagagtgtatttataatgggt
gctactaatagacctgatataatagacccagccattttaaggccaggcaggttagataag
acattgtatgtaggattgccttgtcctgatgacagattagatatactcagaaccattaca
aagaatggaacaagacccaaactttcaacggatgtagatttagaatccttagctaaagat
gaaagatgtaattgttttactggagcagatcttgcagccttagttagagaagcttcaatg
tctgctttaaaagttatgatatctagtcaggatacaagtataatagaagtaaacaaggag
catttcaatacagcattcacaagagtcagaccctctgtgtcacaaaaagaacaactaaag
tatgcaaagttaaaggaacagttacagaatggatga
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