Mycoplasma cavipharyngis: MCAV_00630
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Entry
MCAV_00630 CDS
T10838
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcag Mycoplasma cavipharyngis
Pathway
mcag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCAV_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcag03400
]
MCAV_00630
Enzymes [BR:
mcag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCAV_00630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCAV_00630
DNA repair and recombination proteins [BR:
mcag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCAV_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
V-set
HypA
Motif
Other DBs
NCBI-ProteinID:
XBA50908
LinkDB
All DBs
Position
76016..76855
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AA seq
279 aa
AA seq
DB search
MPELPEVQVFINHLKPLVTNHKIIGLQLNCPKVLKNISYQQFAKNLINFQFTDLTRIGKY
LIFHLSNQKVLVLHLRMEGKPFYQHQDQPYDQKHVLFKIQFDNHYELRYHDMRRFGTVHL
FDQKDYLAQKELAKLGLDPTQTKFNVKYVKNQLSQSLNRSVKTVLLDQTKISGIGNIYAD
EILFAAKIHPKTLVKNLNDADFKMITKAAKSIIKSAIKHHGTTILSFQYKHNQSGTYQNR
LKVHTRKGLKCHHCQTKINKIKVNNRGTYLCDQCQVWKT
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttcaagtttttattaatcatttaaaaccattagttactaat
cataaaattattggtttgcaattgaattgtcctaaagttttaaaaaacattagttatcaa
caatttgcaaaaaacctaattaattttcagtttactgatttaactagaattggtaaatac
ttaatttttcatttaagtaatcaaaaagttttggttttacatttaagaatggaaggtaaa
ccattctatcaacaccaagatcaaccttatgatcaaaaacatgttttatttaaaattcaa
tttgataatcattatgaactaagatatcatgatatgcgcaggtttggaacagttcattta
tttgatcaaaaagattatttagcacaaaaagaattagctaaattaggattagatccaact
caaactaaatttaatgtcaaatatgttaaaaaccaattatctcaatcactaaatcgtagt
gtaaaaacggttttattagatcaaaccaaaatttctggaattggtaatatttatgctgat
gaaattttgtttgctgctaaaattcatcctaaaactttagttaaaaatcttaatgatgct
gattttaaaatgattactaaagcagcaaaatcaattattaaaagtgcaattaaacatcat
ggtacaactattttaagttttcaatacaaacacaatcaatcaggcacatatcaaaatcgt
ttgaaagtgcatacccgtaaaggtttaaagtgtcatcattgtcaaactaaaattaataaa
attaaagttaataatcgtggtacttatttatgtgatcaatgtcaagtttgaaaaacttaa
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