Moraxella canis: U0021_00430
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Entry
U0021_00430 CDS
T10189
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mcah Moraxella canis
Pathway
mcah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0021_00430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcah03019
]
U0021_00430
Enzymes [BR:
mcah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U0021_00430
Messenger RNA biogenesis [BR:
mcah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U0021_00430
SSDB
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Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
NTF-like
ERCC3_RAD25_C
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
WQE04104
UniProt:
A0ABZ0WXX6
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All DBs
Position
complement(108862..110046)
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AA seq
394 aa
AA seq
DB search
MTETTFKNFDDLPLSEATLKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTAT
FLITIIESLLKRPFGDDEVRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITG
GADFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDI
KRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQSIDQQFYLVT
EREKMSALKQILADDSVKKTIVFANRKDQVKRLYDHLRRHHEVTMLSGDVAQQKRERYLQ
RFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPEMPDDYVHRIGRTGRAGLSGVSISFV
SENDAFNLPALESHVDQKFKLSQFEFLDEQEQGS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacgacttttaaaaattttgatgacttgccattgtctgaggcgactttaaag
gcagtgcaagcactaaaatttgatcaattaactcccattcaagcacagattttgccgcac
accttggcaaatcaagatgccatcgggcaggcgcaaactggcacaggcaagacggcgaca
tttttgattaccatcattgagtcactattaaagcgtccttttggcgatgatgaagtccgt
tatcttggcgaacccagagcgctggttttggcgccgacccgagagcttgcgcagcagatt
ttggcggactgtcgcgagctgacccgatttagtcagctttataatttgtgcattacaggc
ggcgctgattttgataagcagcttgagcagctgcacaaaagaccgttggatattttgatt
ggtacgccagggcgcatcatcgattgggttaataaaggcgagctttttttggatcgtgtc
gaggtatttgtacttgatgaagctgatcgcatgctggatatgggcttcatccctgatatt
aagcgcatcgtccggcacatgccaagcaacaccgagcgccaaagccttttgttttcagca
acatttaatcaagatgtgatgaatttggcttatcgctggctgcatcagccagcatttgtt
gagatcgcacctgaaagcaaaaccaatcagtcgattgatcagcagttttatttggtcact
gagcgtgaaaaaatgagcgcgcttaagcagattttggcggatgattcggtgaaaaaaacg
atcgtttttgccaatcgtaaagatcaggtcaagcgcctatatgatcatctgcgccgccat
cacgaggtgacgatgctgtctggagatgtggctcagcaaaaacgagagcgctaccttcag
cgtttcaaagacggtgaggtcaatgtactggtagcaacggatgtggcaggtcgcggcatt
catgtggatgatgtgacgcatgtgattaactatactttgcctgagatgcctgatgattat
gtgcatcgtataggtcgtacagggcgagctggtttgagtggcgtatccatcagttttgtg
agtgaaaatgacgcttttaacttgcctgcgcttgagtcgcatgtcgatcaaaaattcaag
ctcagccaatttgagtttttggatgagcaagaacaaggatcatga
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