Moraxella canis: U0021_03045
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Entry
U0021_03045 CDS
T10189
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mcah Moraxella canis
Brite
KEGG Orthology (KO) [BR:
mcah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcah03021
]
U0021_03045 (rapA)
Transcription machinery [BR:
mcah03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
U0021_03045 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
ResIII
DEAD
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
WQE04581
UniProt:
A0ABZ0WZC8
LinkDB
All DBs
Position
complement(692828..695692)
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AA seq
954 aa
AA seq
DB search
MSDNFAIGQRYLSDSESSLGLGVVIDVDDRCVHILFPQSEETRVYAKASALLSRVVFSAG
DDITDQEGNLYQVASCENIAGVMRYHLTCGKSLMETRLAANITLSKPLERLLAGRIEGAD
WYELRQDALRIQAMLARHPLRGLIGARVDIIAHQLYIAHEVGKRLAPRVLLADEVGLGKT
IEAGLIMHQQILTGKVNRVLVLVPDSLQYQWMIELKRRFNLDFALFDLVRTAAIKEHNPD
QNVFLTEQFIIAGMDLLLDHRDLYEQAYAAGFDLLVVDEAHHLHWDPEQGGNDKYDLVAD
FAASIAGVLLLTATPEQLGVESHFARLRLLDPHRFDDLDDFIAAQDAFEDVAMVASLLID
GQDLSAKQIRAVAGLLGFEEVELADINANERLRTHVINELLDRHGTGRILFRNTRDSVQG
FFGRTSIPYPLPLPTAWQNTHYTQGKLREQLWGEEQYPDGAWLEHDPKVAWLIGLLRQEL
KHKKVLLIARSGATIESLEAVLRLYAGIKTAIFTEQMSLLERDQAAAYFADDAGAQILLC
SEIGSEGRNFQFAQDLVLFDLPANPDTLEQRIGRLDRIGQIAQIQLHVPFVMGTAQERLY
NWYDGALNIFNQISPTAQSVQEAFIAELKLLLEGADTPQNRENLAMLIAQASVYRQELEE
ALQAGRDRLLEYNSCRPNVAARIEVAMRELDDNKLLPLFLDRYLTAVGMDYSVQRDGSWI
IHPIDASEVDVEGIESLPLDEDGMTLTFSRQQALAREDMHYMTYEHPLIQAILEMILTGT
FGNTQVGLLKSAALPKGMLMIENQFRIEAIAAKSLNLSAYLPKQSLRVFLSERGDDLSQV
ATSEKILPLIDRLDKGRARQVAKARAAVIDARTQDAKRIAGAQLDQISAQAKTAFGDYMN
KEIGRLIRLQAINPNVRDDEILALEKLKAQGLQALDNLSLVPDSIRVLVTVAPD
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataattttgccattggtcagcgttacttatccgacagcgaatcaagcctaggg
cttggcgtggtgattgatgttgatgaccgctgtgtccatatcttatttccccaaagtgaa
gaaacgcgcgtctatgccaaggcgtctgcgctgctgtcacgggtggtgttttcagcgggc
gatgacatcactgaccaagagggtaatttgtatcaagtggccagctgcgaaaatatcgca
ggcgtgatgcgctatcatttgacgtgcggcaaaagcttgatggagacgcggcttgcggca
aatatcactttatcaaaaccgcttgagcgtctgctggcgggacgtatcgaaggggcggat
tggtatgagctgcgccaagatgcactgcgcattcaggcgatgcttgcgcgccatccgctg
cgtggcctgattggagcgcgtgttgatatcattgctcatcagttgtacatcgcgcatgag
gtgggtaagcggcttgcaccccgcgtactattggcagatgaggtggggctgggtaagacc
atcgaagctggtctgatcatgcatcagcaaatcctgacaggcaaggtgaatcgtgtgctt
gtgcttgtgcctgacagcttgcaatatcaatggatgattgagcttaagcgccgctttaat
ttagattttgcgctgtttgatttggtgcgcaccgctgccatcaaggagcacaatcccgat
caaaatgtctttttgaccgagcaattcatcatcgcaggtatggatttgttacttgatcat
cgggatttgtatgagcaggcgtatgcagcaggttttgatttattggttgttgatgaggcg
catcatctgcattgggatcctgaacaaggcggtaatgataagtatgacttggtcgctgat
tttgctgccagtatcgcaggtgtgctgttattgaccgcgacacctgagcagttgggcgta
gagagtcattttgcgcgtctgcgcctgcttgatccgcaccgttttgatgatttggatgat
tttattgccgctcaagatgcctttgaagatgtggcgatggtagcgtctttgttgattgat
ggtcaggatttgagcgccaagcaaatccgtgcagtggcaggacttttgggctttgaagaa
gtggagttggcggatattaatgccaatgaacgcctgcgcacgcatgtgattaatgagctt
ttggatcgtcatggcacagggcgcattttattccgtaatacgcgtgatagcgtccaaggg
ttttttgggcgtaccagcattccttatccgctgcctttgccaacggcatggcaaaacacg
cattacacccaaggcaaattgcgtgagcagctgtggggtgaggagcaatatccagatggt
gcatggcttgagcatgatcccaaagttgcttggctaattgggctattgcgtcaagagctt
aagcacaaaaaagtgctgctcatcgctcgcagcggcgctaccatcgaaagcttagaggcg
gtgcttcggctgtatgcaggcatcaagactgcgatctttactgagcagatgagcttgctt
gagcgcgaccaagccgcggcatattttgcggatgacgctggcgcacagattttattatgt
tctgagattggctcggaggggcgtaattttcagtttgcccaagacttggtattatttgat
ttgcctgccaatcctgatacgcttgagcagcgcatcggtcgccttgaccgtatcggtcaa
attgcgcagattcagcttcatgtgcctttcgtgatgggcactgcccaagagcgtctgtat
aattggtatgatggtgcgcttaatatctttaatcaaatcagccccacggcgcaatccgtt
caagaggcttttatcgcagagctaaagctgctgcttgaaggtgctgacacgccccaaaat
cgtgaaaatttagccatgctcatcgctcaagcgtctgtctatcgccaagagctagaagaa
gcactacaagcaggtcgtgacagactgcttgagtataactcatgccgcccgaatgtcgca
gcgcgcattgaggtcgccatgcgtgagcttgatgataacaaattgctaccgctgtttttg
gatcgctatttgacggcggtgggcatggattatagtgtgcagcgtgatggttcatggatt
atccatccgattgatgcctctgaagttgatgtggaaggcatcgaaagcctgcctttggat
gaagatggcatgactttgaccttcagccgacagcaggcgcttgctcgtgaggatatgcat
tatatgacctatgagcatccgctgatccaagccatccttgagatgattttgacaggtact
tttggtaatacgcaagttgggctgctcaaatcagcggcgctaccaaaagggatgctgatg
atcgaaaatcagtttcgtattgaggccatcgccgccaagtcgttgaatttatcggcttat
ttgcctaagcaaagcttgcgcgtatttttgagtgagcgtggagatgatctaagtcaagtc
gccaccagtgaaaaaattctaccactcattgaccgcttggataaggggcgtgctcgtcaa
gttgccaaggcgcgtgcagccgtcatcgacgccagaacccaagatgccaaacgcattgca
ggcgcgcagcttgatcaaatcagcgcccaagccaaaactgcttttggcgattatatgaat
aaagaaattgggcgactgatccgccttcaggcgatcaatcctaatgttcgcgacgatgag
attttagcacttgaaaagctcaaagctcaaggtttgcaggcgcttgataatttatcgctt
gtgcctgacagcattcgagtgttggtgacggttgcgccagattga
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