Moraxella canis: U0021_08470
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Entry
U0021_08470 CDS
T10189
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mcah Moraxella canis
Brite
KEGG Orthology (KO) [BR:
mcah00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U0021_08470 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcah03021
]
U0021_08470 (rpoD)
Transcription machinery [BR:
mcah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0021_08470 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WQE03765
UniProt:
A0ABZ0WX75
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Position
complement(1856065..1857951)
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AA seq
628 aa
AA seq
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MSENNHITEDHDASSSQLGALIRLGKEQGYLTYAEVNDQLPESVTESDQIEDIIQMLTDV
GIQVFEVAPDDDDILLSDTGSDDDMATDEAAAVLASVETEPGRTTDPVRMYMREMGTVDL
LTREGEIGIAKRIEEGTREVQYIMAYWPGTVKFVLDEYQQVLAGEKKISDIVSGFLSGDD
SDFILSEEEVELDLGSPKTTVEDEAEEEDEGESDNAELEDTDDSSLDPEEVRVRFEEMQR
LYDVAQEALAKHGRGSEEVKAAYNELANHFMLIKLNNRLSDQVMSLMREVYEDVRTNERR
IMKLVIRRGKMPMEEFKKTFPSNETNVEWLSHRIEGGPAFADTLAKIEPEVVALQQKLLA
HEQALQMDIRDMKAVARQMAIGEAKARRAKKDMVEANLRLVISIAKKYTNRGLQFLDLIQ
EGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRV
SRQLLQEMGREPTPEELGERLDMDEAKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDN
TISSPIENATAEGLREATREVLDNLTEREAKVLKMRFGIDMPSDHTLEEVGKQFDVTRER
IRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaataatcatatcaccgaagatcacgacgcttcttcatcacagttaggtgca
ctgattcgcctaggcaaggagcaaggctatctcacctatgccgaagtaaacgatcaatta
ccagagtccgtcaccgagagcgatcaaattgaagacatcattcagatgttgactgacgtg
ggcattcaagtatttgaagtagccccagatgatgacgatattttgttatcagacactggt
agcgatgatgacatggcaacagatgaagcggcggcggtattagcatctgttgagactgag
ccaggacgcaccaccgatcctgtgcgtatgtacatgcgcgaaatggggacggtcgatctg
ctgacccgtgaaggcgagattggtatcgccaagcgcatcgaagaaggcactcgtgaagtt
caatacatcatggcgtattggccaggcacggtaaaattcgtgcttgatgaatatcagcaa
gtgcttgctggcgagaaaaaaatctccgacatcgtttctgggttcttaagtggggatgac
agcgattttattctaagcgaagaagaagttgagttggatcttggctcacccaaaaccacg
gtcgaagatgaggctgaagaagaggatgagggtgagtctgataacgctgagcttgaggac
accgatgattcaagccttgaccctgaagaagtgcgcgtccgttttgaagagatgcagcgc
ttgtatgatgtggcccaagaagccctagctaagcatggccgcggcagcgaagaagtcaaa
gcagcttataatgaactggccaatcattttatgctcattaagctgaataatcgtttgtcg
gatcaagtcatgagcttgatgcgtgaagtttatgaagatgtgcgcaccaacgagcgccgt
atcatgaagcttgtgattcgccgcggcaaaatgcctatggaggagtttaaaaagaccttc
ccaagcaatgaaaccaatgtcgaatggctgtctcaccgcatcgaaggcggtcctgctttt
gccgacactttggccaaaattgagcctgaagtggtcgccttgcagcaaaaattgttggca
cacgaacaagcccttcaaatggacatccgtgatatgaaagcggtcgcccgccagatggca
atcggtgaggccaaggctcgtcgcgccaaaaaagacatggtggaagccaacttacgcttg
gtgatttctatcgccaaaaagtacaccaaccgaggcttgcaattccttgatttgattcaa
gaaggcaatattggtctgatgaaagcggtggataaatttgaatatcgccgtggttataaa
ttctcaacctatgcaacatggtggattcgccaagcaatcacacgctctattgctgaccaa
gcacgcacgatccgcattcctgtgcatatgattgaaacgattaataaaatcaaccgcgtc
agtcgtcagctacttcaagaaatgggtcgtgagccgacaccagaggagctgggcgagcgt
ctggatatggatgaggccaaggtgcgcaaagtccttaaaatcgccaaagagcccatctct
atggagacgccgatcggtgatgatgaagatagccacttgggtgattttattgaggataac
accatctcaagtccgattgaaaatgcaacggcagaaggtcttcgtgaagcaacccgtgag
gtgcttgataatttgaccgaacgagaagccaaagtactcaaaatgcgctttggtatcgac
atgccaagcgatcatactctagaggaagtcggtaagcagttcgatgtcactcgtgagcgc
attcgccaaatcgaagccaaggcattgcgtaaacttcgccatccttcacgctctgagcat
ttgcgctcttttttggaaaatgattaa
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