Macrococcoides canis: MCCS_07360
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Entry
MCCS_07360 CDS
T04838
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mcak
Macrococcoides canis
Pathway
mcak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCCS_07360 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcak03019
]
MCCS_07360 (rnr)
03016 Transfer RNA biogenesis [BR:
mcak03016
]
MCCS_07360 (rnr)
Enzymes [BR:
mcak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MCCS_07360 (rnr)
Messenger RNA biogenesis [BR:
mcak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCCS_07360 (rnr)
Transfer RNA biogenesis [BR:
mcak03016
]
Prokaryotic type
tRNA degradation factors
MCCS_07360 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
S1CSD-TOTE-2
OB_HELZ2
RNase_II_C_S1
Rho_RNA_bind
S1_RRP5
Spt6_S1
HEPN_Swt1
Motif
Other DBs
NCBI-ProteinID:
ARQ06386
UniProt:
A0A1W7AAE6
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All DBs
Position
683895..686219
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AA seq
774 aa
AA seq
DB search
MHLYEHEVIAYLKSLKGSAVMIEAIEAHLNLESADAFKDLVKTLVHLEQTGKLSRTKQDK
YFIAFDSNKALVKGTLSQHKKGFAFVRAEDETIDDVFIPPNKINRAMDGDTVLVSVTKAR
DGRNEGEVKAIEKRAITQVVGTYTEAKHFGFVLPDDSRITQDIFIPKGKNLGAVEGHKVL
VELTQYADGTNNPEGMVKAILGHKNDPGVDILSIIYQHGINIEFNPATIEEANNVPDEIS
PSEITGRTDLRDVLTITIDGADAKDLDDAISVDKLDNGNYRLIVSIADVSHYVTEGSSLD
ADAYERGTSVYLVDRVIPMIPHRLSNGICSLNPHADRLTLSCEMEITPNGHTVNHKIYES
IIHSDERMTYDDVNAILEDNDAALINKYAHIHELLLHAKDLAAILKRMRETRGEIDFDLK
EAKILVDKDGVPREVAIRDRGLGERLIELFMLAANETVAEHFAKMKVPFIYRVHEEPKAD
RLKRFFEFITNFGILVKGGTENIHPKTLQNIGKEIHGKPEELVISTLMLRSMQQAKYAEE
NLGHFGLSAEYYTHFTSPIRRYPDLIVHRLIRKYLIEKSMDDKAQEYWAEELVDISEHTS
KRERRAIDAERDTDDLKKAEYMVQHIGEEFDGIISSVANFGMFVELENTIEGMVHNSNMT
DDYYNFDERHMAMIGERHGKVYRIGQKVRVKVVNVNVDERMIDFAIVGMDMKKIEDKIRE
VKIKAKKNTKSTNEKPRKKGRGKARGAEMSKNNKNKKPFYKAKAVKNSGRRKKK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtatgaacatgaagtaattgcatatttaaaatcattaaagggtagtgcagtt
atgatagaagcaattgaagcgcatctaaatcttgagagtgcagatgcatttaaagattta
gtaaagacccttgtgcatttagaacagacaggtaaattgagccgtacaaagcaggataag
tactttattgccttcgacagcaataaagcgctcgtaaaaggtacgttaagtcagcacaaa
aaaggctttgcatttgttagagcagaggatgaaacgatcgatgacgtgtttattccaccg
aataagattaatcgtgctatggatggagacacagtgcttgtcagtgtaacaaaagcacgt
gacggtcgtaatgaaggtgaagtaaaagccattgaaaagcgtgcgattactcaagttgtc
ggtacatacactgaagcgaaacatttcggctttgtattaccggatgactcaagaattaca
caagatatctttattccaaaaggcaagaacctaggggcagtagaaggtcataaagtgctt
gtagaacttacgcagtatgctgatggtacgaataatcctgaaggtatggtaaaagctatt
cttggtcataaaaatgatccaggtgtggatatcttatcgatcatctatcagcatgggatt
aatatagaatttaatccagcgacgattgaagaagcaaataatgtaccggatgaaattagt
ccttcagaaattacaggacgtacagatttacgtgacgttctgacaattacaattgatggt
gcagatgcgaaagacttagatgatgcaatcagcgtggataagctggataatggtaactac
cgcctgatcgtctctattgcagatgtcagtcattatgtaacggaaggatctagtcttgat
gcagacgcttatgaacgtggtacaagtgtgtatttagtggaccgtgtaattccaatgatt
ccgcatcgactcagtaacggtatttgttcgcttaatccacatgcagatcgtttaacatta
agctgtgagatggaaattactccaaatggtcatacggttaatcataaaatctatgaaagt
atcattcattccgatgaacgtatgacttatgatgatgtgaatgcaatattagaagataac
gatgcagcgctgatcaataaatatgcgcatattcatgaactgctattacacgcgaaagat
ttagcagcaatacttaaacgtatgcgcgaaacacgtggagaaattgatttcgaccttaaa
gaagcgaagatattagttgataaagacggtgtccctagagaagttgcaatacgagaccga
ggactcggcgaacgtttaatcgaattatttatgcttgcagcaaatgaaactgttgcagaa
cactttgcgaagatgaaagtaccgtttatctaccgcgtgcatgaagaaccgaaagcagat
cgcctgaaacgcttctttgagtttattacaaacttcggtattttagttaaaggcggcact
gagaacattcatccgaagacgctgcagaatatcggtaaagaaattcacggaaaacctgaa
gaacttgtaatctcaacacttatgctacgctcaatgcagcaggcaaagtatgcagaagag
aacttaggtcacttcggattatcagctgaatattatacgcactttacatcaccaatccga
cgctatccagatttaatcgtgcacagactaatccgtaaatacttgattgaaaagtcgatg
gacgataaagcacaggagtactgggcagaagaactggtcgatattagtgaacatacatct
aaacgcgaacgccgtgccattgatgcggaacgtgatacagatgatctgaagaaagcagaa
tatatggtgcagcatatcggagaagaatttgacggtatcatcagcagcgttgcaaacttc
ggtatgttcgtcgaacttgagaatacgattgaaggtatggttcataattcgaacatgaca
gatgattactataactttgatgaacgtcatatggcgatgatcggtgaacgtcacggaaaa
gtgtatagaatcggtcagaaagtacgcgtaaaagtagtgaacgtcaatgtagatgaacgc
atgattgactttgcgattgttggtatggatatgaagaagattgaagataagattcgcgaa
gtgaaaattaaagcgaagaagaatacgaaatctactaacgaaaaaccccgtaaaaaagga
cgcggaaaagcacgtggcgcagaaatgagtaagaataataaaaataagaaaccgttctat
aaagcaaaagcggtgaaaaattcaggacgtagaaagaagaagtag
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