Macrococcoides canis: MCCS_14940
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Entry
MCCS_14940 CDS
T04838
Symbol
cshB_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
mcak
Macrococcoides canis
Brite
KEGG Orthology (KO) [BR:
mcak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcak03019
]
MCCS_14940 (cshB_1)
03009 Ribosome biogenesis [BR:
mcak03009
]
MCCS_14940 (cshB_1)
Enzymes [BR:
mcak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCCS_14940 (cshB_1)
Messenger RNA biogenesis [BR:
mcak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCCS_14940 (cshB_1)
Ribosome biogenesis [BR:
mcak03009
]
Prokaryotic type
rRNA helicases
MCCS_14940 (cshB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARQ07135
UniProt:
A0A1W7AC64
LinkDB
All DBs
Position
complement(1384786..1386114)
Genome browser
AA seq
442 aa
AA seq
DB search
MDKHPFEHFELAPYLIEAVKDLNFNQPTEIQRRVIPKLKKDTHLIGQSQTGTGKSHAFLL
PLINKIDKDLIQPQVIVLAPTRELAKQLYDASEHLISFTEGIKAGLYIGGTDKNKDIQKS
KVQPQIVIGTPNRIKDLAEENVLHIHLANAVVVDEADLMIDLGFLPTVDKIAANVSRDAQ
IAVFSATIPKALHPFLNKYLSKPEFIEIEPDSKTNKNITFYLVPTKSNDKKEKLVSVMNT
CNPYLAIIFANSRDRADELAEFLQDQGMKVGIIHGGLAPRERTQMMKRVKNLEFQYIIAS
DLASRGIDIEGVSHVFNYDIPKDIDFFTHRVGRTGRGNYTGVAITLYTPDEEDLINQIEK
KGFSFIHSDIKNGELTEIKDRTERRSRQKKEDNIEKSLVHKVKKKKKVKPGYKKKFRYEL
DKIKRNEKKAHSKRVNKQNRKG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacacccatttgaacattttgaacttgcaccatatttgatagaagcggtgaaa
gatcttaatttcaaccagcccacagaaatccagagaagagttattcctaaattaaagaaa
gatacacatttaatcggacaatctcaaactggtacaggtaaatcacatgcattcctgttg
ccgttgatcaataaaattgataaagacttaatacagccgcaggtgattgtgctagcacct
acgcgtgaacttgcaaaacaattatatgatgcgagtgaacatttgatctcctttactgaa
ggtattaaagcaggcctttatatcggaggaacagataagaataaagatatacagaaatct
aaagtacagcctcaaatcgttataggcacaccaaaccgtattaaagatttagcagaggaa
aatgtactgcatattcatttagcaaatgcagtagtagttgatgaagcggatctgatgatt
gatcttggattcttaccgacagtcgataaaattgcagcgaacgtatcgcgtgatgctcag
attgctgtcttttcagcaacgattcctaaagcattacatcctttcttaaacaaatattta
tcaaaaccagaattcattgaaattgaacctgatagtaagacgaataagaatattacgttc
tatcttgttccgacaaagagtaatgataagaaagaaaagctagtgagcgttatgaacacg
tgtaatccatatttagctattatctttgcgaatagtcgtgaccgagcagacgaacttgct
gagtttctgcaggatcaagggatgaaagttggaatcatccatggaggtctggctcctaga
gaacgaactcagatgatgaaacgtgtcaagaacttagaatttcaatatattatagcgagt
gaccttgcaagtcgtggtatcgatatagaaggtgtaagccatgtgtttaactatgatatt
ccaaaggatatcgatttctttacacatcgtgtcggtcgaacaggacgtgggaattacaca
ggtgtagcaattacgctttatacaccagatgaagaggacttaatcaaccagattgagaaa
aaaggcttctcatttattcattcagatattaaaaatggtgaactcacagaaataaaagac
cgtactgaacgtagaagtcgtcagaaaaaagaagataatattgaaaagtcattagttcat
aaagtaaagaagaaaaagaaagtgaaaccagggtataagaagaagttcagatatgaacta
gataagattaaacgcaatgagaaaaaagcacactctaagcgcgttaataagcaaaacaga
aaaggttaa
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