Methylacidiphilum caldifontis: IT6_00575
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Entry
IT6_00575 CDS
T09436
Name
(GenBank) winged helix-turn-helix transcriptional regulator
Organism
mcao
Methylacidiphilum caldifontis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_24
MarR
MarR_2
HTH_11
HTH_34
HTH_5
HTH_45
PadR
DUF5808
Motif
Other DBs
NCBI-ProteinID:
QSR88840
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Position
117091..117768
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AA seq
225 aa
AA seq
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MNSLLSNLIKDSRYNILFELKRNPGLSISELTKKINLSYMGVKQHCLALEKEGFLETHKR
QKSVGRPEIVYCLTEKADVFFPKDPSFFVEKLLNGIEALYGSLVLDRLLYWVYRKDGEYL
SQAVKNLPLEDRAKELLSFREEKGYMGRLVIDNEIEYKIIEFHNPILALLDKYPIIRSFE
KKMFEKVLGVPVKRIEDRSFGSYYCTFLFQYPPSNSVHPNAEQNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccttttatccaatctgataaaagattctcggtataatatactttttgagtta
aaaagaaatccaggactttctatcagtgaattgactaaaaaaattaacttgtcttacatg
ggtgtaaagcaacactgcttggcattggaaaaggaaggctttctagaaacccataaaaga
cagaaatcggttggtcgacccgagattgtctattgtttaaccgaaaaagccgatgttttt
tttccaaaggacccttccttttttgtcgaaaaattgctcaatggaatcgaagctttatat
ggttctttggttttggatcggctgctatactgggtttatagaaaggatggagaatactta
agccaagctgtaaaaaatttacccctggaggacagagcgaaagagcttttgagttttagg
gaagaaaaaggatatatgggaaggcttgtgattgataatgagatagaatataagattatc
gagtttcataatcctattttagctcttttagataagtatccgataataaggagttttgaa
aagaaaatgtttgaaaaggtattaggggttcctgttaagcgcatcgaagataggtctttt
ggaagctattattgtacgttcttatttcaatacccaccctctaactcagtccatcccaat
gcagaacagaatggttaa
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