Methylacidiphilum caldifontis: IT6_01105
Help
Entry
IT6_01105 CDS
T09436
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
mcao
Methylacidiphilum caldifontis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
AAA_5
Mg_chelatase
FleQ
AAA_16
AAA_3
Response_reg_2
AAA_7
MCM
TIP49
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QSR88935
LinkDB
All DBs
Position
complement(227065..228393)
Genome browser
AA seq
442 aa
AA seq
DB search
MASILIVDDDQSFRRAFSKTIRLLGYGVSETADALEAIELAKQADLVFLDLKLKDQDGLD
LLQKIQKLDKKPPVIILTAFSNSFNTIEAMKKGAFDHLAKPIKRQEIREVIERALNSNLS
LPSLKIQPEEQEDIIGQSPSMRRVQKFIGFAASCDYPVLISGETGTGKQLVARAIHRHSS
RGVGPFVEINCAAIPEHLFESEFFGHTKGAFTGAFKDRKGKFVEASGGTLFLDEIAEMPL
PMQAKLLKALSEKRISPVGSETTFSVDVRIVAATNKNLLDQVMNGRFRADLFYRIQVLQI
EIPPLRERKSDILLLSEYFLDKYFAGSSKKFSFDAQKVLLEYCWPGNVRQLENVIRRAGI
ISRGQLINVADLEISPLVDKEPKLEKEDFLQLDFFSAIAKLEKFLIEKALKESQGNRTEA
ARLLNIHRSLLYIKMKEHKIDI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcatattgattgtagatgatgatcagtctttccgtagagctttttcaaaaacc
atccgtttattgggttatggcgtttcggaaactgcggatgctttagaagcaatagaactt
gccaaacaagccgatctagttttcctcgacttaaaacttaaggatcaagacggtcttgat
ctactgcaaaaaatccaaaagctggataaaaaacctcccgtcatcattctcaccgctttt
tctaatagttttaataccattgaagcgatgaaaaagggggcttttgatcatcttgctaaa
ccgatcaaaaggcaggagattagagaagttatagaaagagctttgaacagcaacttatca
ttgccttctttaaaaattcaacccgaagaacaagaagatatcataggtcagagcccatct
atgcgcagagtccaaaaatttatcggctttgccgcttcttgtgactatcctgtgcttata
tctggagagactggaacaggaaaacaattagttgctcgtgccatacatcggcacagctca
aggggagttgggccttttgttgagatcaattgtgctgcgattcccgaacatctttttgag
tccgaattttttggtcatactaaaggcgcttttacaggagcatttaaagatcgaaaggga
aaatttgttgaagctagtgggggaactctttttcttgatgaaatagctgaaatgcctcta
cctatgcaggcaaagcttttaaaagctctttctgaaaaaagaattagccctgtggggtca
gaaacaactttctcagtcgatgtccgtattgttgctgcgacaaacaagaatctattagat
caggtaatgaatggtaggttccgagccgaccttttttaccgaattcaggttttgcaaata
gaaatacctcccttgcgtgaaagaaaatcagatattcttcttctttcggaatattttcta
gataaatattttgctggctcatccaaaaaattcagttttgatgcacaaaaagttctttta
gaatattgctggccaggaaatgttcgacagttagaaaacgtcatccgtcgagcaggaatt
atatctagaggacagttgatcaacgttgctgaccttgaaattagccccctagtagacaaa
gaaccgaaattagaaaaagaagattttcttcaattagattttttttcagccatcgcgaaa
ctcgaaaaattccttatagaaaaagcccttaaggaaagccaaggtaatcgcaccgaagca
gcgcgtctattaaacatccatcgcagtttgctctatataaaaatgaaagaacacaaaatc
gatatataa
DBGET
integrated database retrieval system
