KEGG   Methylacidiphilum caldifontis: IT6_01190
Entry
IT6_01190         CDS       T09436                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mcao  Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:mcao00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    IT6_01190 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcao03019]
    IT6_01190 (rnc)
   03009 Ribosome biogenesis [BR:mcao03009]
    IT6_01190 (rnc)
   03036 Chromosome and associated proteins [BR:mcao03036]
    IT6_01190 (rnc)
Enzymes [BR:mcao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IT6_01190 (rnc)
Messenger RNA biogenesis [BR:mcao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IT6_01190 (rnc)
Ribosome biogenesis [BR:mcao03009]
 Eukaryotic type
  90S particles
   RNase
    IT6_01190 (rnc)
 Prokaryotic type
  rRNA processing factors
   IT6_01190 (rnc)
Chromosome and associated proteins [BR:mcao03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IT6_01190 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_MRPL44 DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: QSR89692
LinkDB
Position
242011..242754
AA seq 247 aa
MQLKELEKRIGYIFKNPRLLEEALTHPSYFVESIKINGEDFQRLEFLGDAVLGLAITEKL
FHSFPSFDEGKLTKLRARLVSRKNLSPLASVLGLGKFLRLGRGEEKNQGRIKPSNLANAL
ESIIGALYLDGGWERAKLFIFELFNPLFMELEKDPFRFLEHENSKGLLQELLQKKGTELP
VYRIVLESGEAHNKWYEVEVLWKNQILGRGSGKSKKEAELRAAKEAFEKLVSQTPPDSIQ
GLGHSSP
NT seq 744 nt   +upstreamnt  +downstreamnt
attcaactcaaagagttggaaaaaagaattggatatatatttaaaaatccccggctactt
gaagaagctttaacccatccttcctattttgttgaatccataaaaatcaatggagaagat
tttcaaaggttagagtttctaggagacgctgtcttaggactagctattaccgaaaaacta
tttcattcgtttccctcttttgacgaaggaaaactgactaagttgagagcacggttagtg
agtcgcaaaaatttatctcctttagcttccgtcttaggactaggcaagtttttgcgttta
ggtagaggagaagaaaaaaatcaaggaagaataaaaccttccaatttagctaatgctttg
gagtcaataatcggggctttgtatctggatgggggatgggaaagagctaagttatttatc
tttgagctattcaatcctctgttcatggaacttgagaaggacccttttcgatttcttgaa
catgagaactcaaagggattacttcaggaactgctgcagaaaaaaggaacagagttgccc
gtttatcgcatcgtcctggaaagtggggaagctcataataaatggtacgaagtcgaagtt
ctatggaaaaaccaaatcttaggaagaggttctgggaaaagcaaaaaagaggcagaactt
cgagcagctaaggaagcttttgagaagttagtgtctcaaacacctcccgattcgattcaa
ggacttggacatagttctccataa

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