Methylacidiphilum caldifontis: IT6_01880
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Entry
IT6_01880 CDS
T09436
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IT6_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcao03400
]
IT6_01880
Enzymes [BR:
mcao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IT6_01880
DNA repair and recombination proteins [BR:
mcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IT6_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HHH
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QSR89068
LinkDB
All DBs
Position
complement(386483..387391)
Genome browser
AA seq
302 aa
AA seq
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MLDYSIEQISCDWSLVGEVDKQLVDIDATLGSGQTFSWQRLANGIWIGQIGEVPYALVPE
KKLSIYSPLGSFCAFKKYFQIELDLEKVLSSFPPKDRTLNKALHYCPRLRILKQDPWETL
VSFLCSSAKPIVQIRKIVSRIRAFYGREVYPGFFSFPTAEEILDRGPTGLKEAKLGFRSD
FIWSVSSIIWPMKKDYFFELEKTSTENIRHILMELPGVGRKIADCVLLFGFARLDVFPID
RWMERVLKTFYPSFLNKTKITSKDLIDFSSTYFGPFAGYAQQYLFYWSRSAFWKKGGLWE
YH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctggattactccattgagcaaattagctgtgattggtctcttgttggagaagttgat
aagcaacttgtcgatatcgatgccactttgggatcgggtcagactttttcatggcagagg
ttagcaaatggcatatggataggccaaataggtgaagtgccttatgctttagttcccgaa
aaaaagctgtcaatttatagcccactgggttctttttgtgcttttaaaaagtatttccaa
attgaactggatcttgaaaaagtgttgagcagttttcccccaaaagataggactttgaat
aaagcgttgcattattgccctaggctcaggatattaaaacaggatccgtgggagactctt
gtcagctttctctgttcctctgcaaaaccgatagttcaaattcgcaaaatagtcagccgg
ataagagctttttatggtcgtgaagtctatccagggtttttttcctttcccactgctgaa
gagatcctggacagaggacctacagggttaaaagaggctaaactgggtttccgttcagat
tttatttggtcagtttcatccattatttggccaatgaaaaaagattacttctttgagctt
gagaagacttcaacagaaaacattagacatatactaatggagttgccaggggtaggaaga
aaaattgccgactgtgtacttctttttggatttgcaagactagatgtttttcctatcgac
cgatggatggaaagagtattaaaaactttttacccctctttcttaaacaaaaccaagata
acttctaaagatcttatcgatttttcttcaacctatttcggtccttttgcaggttatgcc
caacaatatcttttttattggtcaagatcagcattctggaaaaaagggggtctttgggaa
taccattaa
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