Methylacidiphilum caldifontis: IT6_02225
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Entry
IT6_02225 CDS
T09436
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcao03400
]
IT6_02225
Enzymes [BR:
mcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT6_02225
DNA repair and recombination proteins [BR:
mcao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IT6_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QSR89126
LinkDB
All DBs
Position
complement(461996..465160)
Genome browser
AA seq
1054 aa
AA seq
DB search
MNREKQLDHLIVVASAGVGKTHKLVERVLELLMGEILPHSLVVITFTKKAAQEIVDRLFS
TLAKLAVPLTDREGIEPDLFSQNKKACRALKMLIEHLPSLHFQTIDSFFYFLLNYIPLDK
RTSFARFSILDEKAKKTIQVELIRNVLSSKEFDPSFVDNFKVFLGDDLKTIFSNYLSLVQ
KYYPYFSDFPSVDLWGDPRLVTSNEETIKDPAFLSLLDEIGSYLKSLDMPTKTWEEQKLK
INSLPRLYQNVLKAYDPQTAQCDQITLERKKYPLAEPLASALGKLAEKTIDYFIEKSHRR
TRAVAHLLSVYDLYYRKSVTNQGFCSFEDIPRIILEATGLNSSYPFLYNLDQKWNHFLID
EFQDTSLLQWKVIKLFVDELIQYQDGSRSFFCVGDPKQSIYGWRGACSELIDSVESQYKL
KREELIGSRRSSKAILDFVNMIFGNFEVIDKLLPESLEKWKKRWVDQQAMDVELEGYSCF
LCVETAKKEKNGENFVEENGEEEETDNCISLYEALEKLLVEEIKPQERHLSCAILVQTNR
KAEAIFQHLSLCPSLRVSLEGKLYPGKDSLIGKLFFALVQALAHPGDSLALGWLRSTPFG
SVFQDEVSWRKAFWKVFFLEGFEGLAFQFFSLLQQAVVLDDFHKERMEMILQICQAFDKT
GSRNFERFLSHYKDFSLPLSEDPSSVQVRTVHSAKGLEFDVVIVTELLGRETAMNKPRDV
PIAYTSSRGESKLFFLPRKEIAEKEPQLSCLYEELVAEEQLEKLSLLYVAMTRARQGLYI
VGEIQQQTNGKNSTRQSVYWQDLLLEGLGTTSFHRNLFFPDYPLVTLFETGKREWNPRPK
KEFFKLEEKKEAKSQDFPYPPRPLSRTQFVSPSTLEPNAQELNLYSLFSLDKGKRIDHGL
IVHKIFSQIERLSEDILFKLKQKALEYGQKDKERNPFKEVLDCLQSPSIKEIFTPKEETK
IWIERSFCVEVEGQWVRGTLDRVHVEKDLLGNVQCSIYDFKTDAISLDKKEELVKKYLSQ
LILYRKALCQLLDIDSSRIKVFLVSVFLKEVMAL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggaaaaacagttagaccacttgatagtcgtagcttctgctggagtgggaaag
actcataagctagttgaaagagttcttgagctgttaatgggtgaaattcttccccattcg
ctggtagttattacttttacaaaaaaagcggcccaggaaatcgtagatcggctattttca
actttagccaagctagcagttcctttaacagatagagaagggatagagccagatcttttt
tcccaaaataaaaaggcctgtcgagcattaaaaatgcttatcgaacatcttccttccctg
cattttcaaacgatcgactcttttttttattttctactgaattacattccgcttgataaa
aggactagttttgcccgtttctcaatcctggatgaaaaagctaaaaaaaccatccaagtg
gaattaatcaggaacgtattaagttcaaaggagtttgacccttcttttgtagacaacttt
aaggttttcttgggggatgatcttaagacaatcttttcaaactacttatccttggtacag
aaatactatccttatttctctgattttcccagtgtagatttatggggagatcctcggttg
gttacaagtaacgaggagacaattaaagatccagcttttctttccctgctcgatgagatt
ggatcctacctaaaatctctggatatgccgactaaaacatgggaggaacaaaagttgaaa
atcaactcccttccaagactgtatcagaatgtcttgaaagcttacgatcctcaaacagct
caatgtgatcaaataactttggaaaggaaaaaatatcctttggccgagcctctagcttct
gcattgggaaagctagcagaaaagacgatcgattattttattgaaaaatcccaccgcagg
actcgagctgtggcgcacctactgagcgtttatgatctttattatcgaaaaagtgtaacc
aaccagggtttttgcagttttgaagatattccgaggatcatcttagaagccactggatta
aacagttcttatccttttttgtacaaccttgaccaaaaatggaatcattttctcatcgat
gagttccaggatacgagtctattacaatggaaagtgatcaagctttttgttgacgagctg
atccaataccaggatgggtcacggtcttttttctgtgttggagatccaaaacaaagcatt
tatgggtggaggggagcatgcagtgaactgatcgattcagtcgagtcccagtacaaacta
aaaagggaggagctgatcggttcaagaagatcatccaaggctatcttggattttgttaac
atgatctttggtaattttgaagtgattgataaacttttacccgaatctttagagaaatgg
aagaaaagatgggttgatcaacaagccatggatgtagaactggaaggatatagctgtttt
ttgtgcgttgagacagctaaaaaagaaaaaaatggagagaactttgttgaagagaatggg
gaagaggaagagaccgataattgtatttccctgtatgaggctctagaaaaactgttggtt
gaagagataaaacctcaagaacgacatttgagttgtgccattcttgttcaaaccaacagg
aaagctgaggctatttttcaacatctttccttgtgtccttctttaagagtatccttggaa
ggaaagctttatcccggaaaggatagtttgattggaaaacttttctttgccttggtccaa
gctttagctcaccctggagattccctggctttggggtggcttagaagtacacccttcggt
tcggttttccaggatgaggtgtcatggagaaaagcgttttggaaagttttttttctcgaa
ggatttgaaggactagcttttcaatttttttctcttcttcaacaagctgtagtgctggat
gactttcacaaggaaaggatggagatgattttgcagatttgccaggctttcgataaaacg
ggcagtagaaattttgagagatttttaagtcattacaaagatttttctttacccctatct
gaagatccttcttcagttcaagtcagaacggtgcatagtgccaaggggcttgaatttgat
gttgttatcgttactgagttactgggccgagaaacagcgatgaataaaccccgggatgtt
cccatagcatatacatccagtcgcggggaaagtaagcttttttttcttcctcggaaagag
attgcagagaaagaaccccaattgtcctgcttgtatgaagagcttgttgctgaagaacag
ctggaaaaactttcgcttctttatgtcgccatgactagggcaagacaaggattatatatt
gtaggagaaattcagcagcaaacaaatggaaaaaactcaaccagacagtcggtttattgg
caggacttgctgcttgagggactgggaacaacgtcttttcacaggaacttgttttttcct
gattaccccttggtaaccctttttgaaacaggaaaaagggaatggaatcctcggcctaag
aaagaatttttcaaactagaagaaaaaaaggaggcaaaaagccaggattttccttatccg
ccaaggcctctatcccggacccagtttgtttctccatctactttggaaccaaacgctcag
gagttgaatctttattctttattttctttggataagggaaaaagaatcgatcatgggtta
atcgttcataagatattttcccaaatcgaacggctttctgaagacattttattcaagctc
aagcaaaaggctttagaatacggccagaaagataaagaaagaaatccttttaaagaagtc
ttggattgtttgcaatcaccatccattaaagaaatattcactcccaaagaagaaacaaaa
atatggattgaacgcagtttttgtgttgaagtcgaaggacagtgggtcagaggtacgctt
gatcgggttcatgttgaaaaagacttactggggaatgtccagtgttccatttatgatttt
aagactgatgctatttctttggataagaaagaagagcttgttaaaaaatacctttctcag
cttattctttaccgcaaagctctttgccagcttcttgatatcgactcttcacggataaaa
gtttttcttgtctctgtttttctcaaggaggttatggctttgtaa
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