Methylacidiphilum caldifontis: IT6_04455
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Entry
IT6_04455 CDS
T09436
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao02024
Quorum sensing
mcao03060
Protein export
mcao03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IT6_04455 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IT6_04455 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT6_04455 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mcao02044
]
IT6_04455 (secD)
Secretion system [BR:
mcao02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IT6_04455 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
ACR_tran
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
QSR89530
LinkDB
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Position
complement(944631..946922)
Genome browser
AA seq
763 aa
AA seq
DB search
MLFVSFSTALFFLVTLIWYFTASDDRTKRWVGLACSISILCNAFFSLVPPAEKIKLGLDL
KGGTAFLLELQGEPSARALDQAIGVIRKRVDKFGLSEPIIQPIGKKRISVQIPGLSESEK
VAAKEQLSKVAKLEFRLVHPDTDKLLASIQSGQEKVPLGYEILPFSLEESRGNKQEAFIL
VRKREEMGGKYVRRAFRGFDEVGRPTVVIEFNEEGSKRFGEITSHNIGKRLAIVLDGEVK
SAPVIQTAIFKNAVISGGNMTPKEAEDLASVLENPLETPVKILEERGVDPSLGKDSIISG
VNAALAAFGSVVLFMVFYYRTAGVVAVIALLVNLLLLLGLLAQFHFTLTLPGIAGIILTI
GMAVDANVLIYERIRDELESGVNVKNAIFIGFNKAFSAIFDSNVSLIIPSIILMELGSGP
LQGFAVTLVLGIVANLFAALVFSRNLFEWLLSWGMLRKLAMMKFLHKPNFDFIKLSWITV
PTAAILLVVGMATFFLRSGELLGVDFSGGDSITVTYKQGVPLAKVRQSLEEAKIHPSLLQ
YTRENNQMIYQVRYGEGEKSVNILREKFPQAGFSLSRMDSVGPVVGDELKNRAALSLSLG
LLAILVYVSLRYEWSFALAAGLGQLHDVLLAIGIMALLGKEFDMYLIGAFLTILGYSINE
KIVISDRIRETLKYKGNISFKEIINEGINKTLARTIMTGGTVVLATVSMLILGGYVISVF
ALAILIGVLAGMFSSHLISPALLYWFHKITEKRKKISIQTQTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgtttccttttctacagccctttttttccttgtcactctcatctggtatttt
accgcctctgatgatagaacaaaaaggtgggtaggtttagcctgcagcatttcaatcctt
tgtaatgcttttttttctctcgtcccccccgcagagaaaattaagctaggcttggatctc
aaaggagggacggcttttttacttgagctccaaggtgaaccttcagcaagggcactcgat
caagccatcggggttattcgcaaaagggtggataaatttggtctttctgaaccgatcatt
caacccataggtaaaaaacgcataagcgtgcagatcccggggttatctgagtcagaaaag
gttgcagctaaagaacagctttccaaggttgctaagctggaatttcgacttgttcatccc
gatacagataagcttttagcttctatccaatctggacaggaaaaagtacctttaggttac
gagatcctccctttttccctggaagagtcaaggggtaataagcaagaggcctttattcta
gttcgaaagagggaggagatggggggaaagtacgtacggcgtgcttttcggggttttgat
gaagtgggtcgaccaacggtcgtgattgaatttaatgaagagggttctaagagatttgga
gaaattacatcacacaacattggcaaaaggttggctattgtcttggatggcgaagtcaag
agtgctcctgtcattcaaacagctatttttaaaaatgctgtcatttctggaggcaacatg
acccccaaggaagcggaagaccttgctagcgttcttgaaaatccgctggagacccccgta
aagattctagaggaaagaggggttgatccttccttagggaaagactcgattatcagtgga
gtaaatgctgccttagccgcttttggctccgttgtcctctttatggtcttttattacagg
actgctggtgttgtcgctgtcattgcccttcttgtgaacctactgctgcttttaggattg
cttgcacaatttcattttacccttaccttgcctggcattgcaggaatcattttaactata
gggatggccgttgatgctaacgtcttgatttatgaacgaatccgagacgaacttgaaagc
ggagttaatgttaaaaacgcgatttttattggttttaacaaagcctttagtgctattttt
gactccaatgtgagcttgattattccctccattattttgatggaacttggaagtggacca
ctacagggatttgctgtgactttagttttgggaatcgtggctaatctttttgctgccctg
gtattcagcaggaatttgtttgaatggcttttgtcttggggaatgttaagaaagctggcc
atgatgaaatttctccataaacctaatttcgactttattaaattgagctggataaccgtg
cccaccgctgccattcttttggtggtgggcatggcgacttttttcctaagaagcggagaa
ctgctgggtgttgatttttctggtggggattccattaccgtgacttataaacaaggtgtt
ccccttgcaaaagtaaggcaatctcttgaggaagcaaaaattcatccaagcctccttcag
tacacccgggagaataaccagatgatttaccaggtccggtacggggagggggagaaaagt
gtaaacattcttagggagaaatttcctcaagcgggttttagtctttctaggatggatagt
gtgggtccagtggttggagacgaactgaagaaccgggctgctttatccctttccttgggg
cttctagccatccttgtttatgtatcgttacgttatgaatggtcatttgcgttggcagcg
ggactaggccagcttcatgatgtattgctagctattggcattatggctcttttaggaaaa
gaatttgatatgtacttgatcggcgctttcttgaccatcttgggttattcaattaacgag
aaaatcgtcatttcagatagaattcgtgaaacattaaaatacaaagggaatatttccttt
aaggagattattaatgaagggattaacaaaacccttgcccgaacgatcatgactggagga
acagttgttcttgcgactgtttccatgctcattcttggggggtatgtcatttctgtgttc
gccttggctatcctgatcggtgtccttgcgggtatgttttcttctcacttgattagtccc
gccctgttgtattggtttcataagataaccgaaaaaagaaagaaaatatctattcaaacc
caaactgtttaa
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