Methylacidiphilum caldifontis: IT6_05265
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Entry
IT6_05265 CDS
T09436
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcao03016
]
IT6_05265 (truB)
Enzymes [BR:
mcao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IT6_05265 (truB)
Transfer RNA biogenesis [BR:
mcao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IT6_05265 (truB)
Prokaryotic type
IT6_05265 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QSR89673
LinkDB
All DBs
Position
1124183..1124896
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AA seq
237 aa
AA seq
DB search
MDIDGVLLIDKPKGFTSHDVVDFVRKKFKIRKVGHCGTLDPIATGLLVLVLGKATKIQEL
LMSEDKRYEGLLRLGQTTSTQDSDGQIIEEKPVPFFTLEEIQKVFDRYVGDIYQLPPMFS
AIKSHGVPLYKLARQGKEVERTPRLVHVYSYTIKKWDPPFIDFEVFCGKGFYVRTYCHDI
GQDLGCGGHLFSLVRLQSGNFKLNQALSFDFLKSLKSPEELLNHVLSLPEVSRIRRQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatggtgttctattgatagacaagcctaagggattcacttcccatgatgtt
gtggattttgtgagaaaaaaattcaaaattagaaaagttggccattgcggtactctagac
cctatagccactggactccttgtgcttgttttaggaaaggctacaaaaattcaagaattg
cttatgtctgaagataagcgctacgaagggttgttgcgacttggacaaacgacttcaacc
caagattctgatgggcagattattgaagaaaaaccggtacctttttttactttggaagaa
atccagaaagtttttgatcggtatgtcggagatatctaccaacttcctccaatgttctct
gcgattaaaagccatggtgttcctctgtataaacttgccaggcaaggaaaagaggtcgaa
agaacaccccggctcgttcacgtctacagctatacgattaaaaaatgggatccccctttc
atcgattttgaggtcttttgcggaaaagggttctatgtccgcacttattgtcatgacatt
ggacaggacttgggttgcggtggacaccttttttctctagtccgtctccaatctggaaat
ttcaagttgaaccaggctctttcttttgatttcctaaagtctttgaaaagccccgaagaa
cttttaaaccatgtgctttcccttcccgaggtctccagaatccgtcggcaatga
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