Methylacidiphilum caldifontis: IT6_05365
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Entry
IT6_05365 CDS
T09436
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcao03032
]
IT6_05365
03036 Chromosome and associated proteins [BR:
mcao03036
]
IT6_05365
03400 DNA repair and recombination proteins [BR:
mcao03400
]
IT6_05365
DNA replication proteins [BR:
mcao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IT6_05365
Chromosome and associated proteins [BR:
mcao03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IT6_05365
DNA repair and recombination proteins [BR:
mcao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IT6_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QSR87842
LinkDB
All DBs
Position
1144694..1144999
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AA seq
101 aa
AA seq
DB search
MANEEKKQVRFNKANLVEVVQKNMGKDTTKALAEKSVDAVINGLKTGVLKNGIVQLIGFG
TFRVITRKARTGVNPKTGEKIKIKASKTVRFSPGKELKEKL
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgaagaaaaaaagcaggttagatttaataaggcaaatttagttgaagttgtc
caaaaaaatatgggcaaagatacaactaaggctttagctgagaaatcggttgatgctgtc
atcaatggtctgaagactggagtattaaaaaatggaatcgtgcagttaatcggttttgga
accttccgagttattacaagaaaagctaggacaggcgtcaaccccaaaactggagaaaaa
attaaaattaaagcctcaaaaacggtccgtttctctcccggtaaagaattaaaagaaaag
ttgtaa
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