Methylacidiphilum caldifontis: IT6_05765
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Entry
IT6_05765 CDS
T09436
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcao03016
]
IT6_05765 (truA)
Enzymes [BR:
mcao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IT6_05765 (truA)
Transfer RNA biogenesis [BR:
mcao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IT6_05765 (truA)
Prokaryotic type
IT6_05765 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QSR87911
LinkDB
All DBs
Position
complement(1234277..1235044)
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AA seq
255 aa
AA seq
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MNLALVGYKLILSYYGSGFHGWQKQGKLPTVQLYLEEAVAKIWKEKIPVEGAGRTDAGVH
ALGQVASFVAQKRLEAEVLKRALNYHLVETIRIWDVHIVSQEFSARFDAMAKTYQYMIWN
NPVMDPFYIWRAWHIPRPLDIKAMNEAAQLFVGKHNFLAFVTSPGMPIKNPIRTVFQCSF
AQQQSLLLFTIKADGFLYRMVRNIVGALVKVGLGRLSLEQLKFIFESQKRTLAPASAPPW
GLYLLSVDYPQDKES
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttagctcttgttggctataagcttattctttcttattatggtagcggtttccat
ggttggcaaaaacaggggaaactgcctacagtccaactttatcttgaagaggcggttgcc
aagatttggaaagaaaagatccctgttgaaggcgcaggacgtactgatgcgggggttcat
gcactaggacaagtcgcttcttttgttgcccaaaaaagattagaagccgaagtgctcaaa
cgggccctgaattatcatttggttgaaaccattcgcatttgggatgtccatatagtttct
caagagtttagtgctcggtttgatgcaatggctaaaacctaccaatacatgatctggaat
aacccggttatggatcccttttatatctggagggcatggcatataccaaggccgttggat
ataaaggcgatgaatgaagcagctcagctgtttgtgggtaagcacaatttcttggctttt
gttacaagtcctggaatgcctattaaaaaccctattagaactgttttccagtgttctttt
gcccaacagcaaagccttttactttttacaattaaagccgatggttttctttaccgtatg
gttcgcaatatagtgggggcattagtcaaagtgggattagggagattaagtttggaacag
ttaaaattcatttttgagagtcaaaaaaggacactagcccctgcctcagcccccccgtgg
ggcctatatcttttgtctgttgattacccacaagacaaggaaagctga
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