Methylacidiphilum caldifontis: IT6_05810
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Entry
IT6_05810 CDS
T09436
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mcao02048
]
IT6_05810 (cas4)
Enzymes [BR:
mcao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
IT6_05810 (cas4)
Prokaryotic defense system [BR:
mcao02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
IT6_05810 (cas4)
Subtype I-B factors
IT6_05810 (cas4)
Subtype I-C factors
IT6_05810 (cas4)
Subtype I-D factors
IT6_05810 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
IT6_05810 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSR87920
LinkDB
All DBs
Position
complement(1248480..1249178)
Genome browser
AA seq
232 aa
AA seq
DB search
MINDSVPNDKITGPTVNDHICISALNHYEYCPTRCYWIYVTGEFLDNEYTIEGELIHENV
HKTMKTTRGDLVQLRKVLIYSRKYALLGFADLIEENSGDIYPVEYKRGRRGDWKNDKLQL
CAQALCLEEMLDETVDHISFLDKRNLMVQRPVTRIPKGFIYYASTGRRVEVVLDDELRKY
TIETIERVRQLMRDAVKPLAVYKNQCRGCSLYPVCLPKEEKKTKKVKLDFYR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgactcagtcccaaacgataaaatcacagggccaacggttaatgaccatatc
tgcatttcagcccttaatcactatgaatattgtccaacaagatgttactggatctatgta
acgggtgagtttctggataacgaatatacgattgaaggagaattaatccacgaaaacgtc
cataaaacaatgaaaaccactaggggtgacctagttcaactaaggaaggttcttatatat
tccagaaaatacgcccttctaggatttgccgatctcattgaggaaaactcgggagatatc
tatcccgtcgaatacaagaggggaaggcgtggagactggaaaaacgacaagcttcagctt
tgcgctcaagctctttgtcttgaggaaatgctcgatgagacagtcgatcatatttcgttt
ttggataaaagaaatctaatggtacaaagacctgttaccagaatcccaaagggattcatc
tactatgcctcgacaggaaggagagtagaggtggttcttgatgacgagttaagaaaatac
acaattgagaccatagagagggtaaggcaacttatgagggatgctgtcaaaccccttgct
gtctacaagaatcagtgtagaggttgcagtctctatccagtgtgccttccaaaggaagaa
aagaagacaaagaaggtcaaactggatttttatcgatag
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