KEGG   Methylacidiphilum caldifontis: IT6_05820
Entry
IT6_05820         CDS       T09436                                 
Symbol
cas3
Name
(GenBank) type I-D CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mcao  Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:mcao00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mcao02048]
    IT6_05820 (cas3)
Enzymes [BR:mcao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IT6_05820 (cas3)
Prokaryotic defense system [BR:mcao02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    IT6_05820 (cas3)
SSDB
Motif
Pfam: DEAD ResIII Stn1 PhoH Helicase_C DUF6848
Other DBs
NCBI-ProteinID: QSR87922
LinkDB
Position
complement(1250129..1252441)
AA seq 770 aa
MSIEIDLLPHFEPLASDNPFNDKLPYLLDHQLETFNSVKDNDLIFNLSTTGTGKTLAALL
GLLNFPTSNALIIAPTNALVSQHKRDAEDFKKKFNLSHIVVELTKEKLEDIDIDAQRAAE
KIYRLLSNPISILEEKPVEKKPFILVTNPDIFYYSIFYLFNSLDKRNVAQEFMIDFNYII
IDEFHYYNAKQFANFLYFIILSYKFGFFEKQNRKIVILTATPDLQFREFICKLKKLNIRI
KEIEPKVFPGKPSTPVLSELVLNLFPLQKLSDFPRKIEYFLDLIKQNIREDKDGLIISSS
LRNINIIAKNLNSSSIKDRYARITGPINREEREKASFKPLILATPTVDIGYNFVGRQKER
QNIDFGYFDAKYIDQFWQRLGRIGRVLGKPIHNEVSYAYAFIPEEAYLLIQQKLNSYNYK
RNEFKQSFEEQLNGLMRRDLNTEYISYFSLLEVMLPIKNILEITPNDLKDFIEETFETIK
HVYSPKSKRSFRSLYNEIKEFQNIKKVLKDLEITPCQLKNNESQTLLQEKYGTNFTIAKQ
LIENGDNEIKKEFMFFLRNKIAKYDAMFKFRDNQIDISVSVYDPYSLISESKDYVLLDFL
HLIRNFDFELFDDKNDAFKKTRREPPEAELYVIAKDILPQPRIIRIAYSLPEYMNFEDYD
NELVGDFISLNNLMILGFKKDFKGEDLVPLPREISMAIYDKFVTGIILPKNFNPSIIYKC
INNEFYPFELEVTSNGKSKLYLFFMGIDAHKFFSKYGWSLKKLNSTVFIA
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgagcattgagatcgatcttcttccacattttgagcctctggcctcagacaatcctttt
aatgataaactgccatatcttctagatcaccagttagaaacatttaactcagtcaaagat
aatgacttaatattcaatctatctacgactggaacagggaaaacacttgcagctttactt
ggactcttaaattttccgacatctaatgctttaattatagctccaactaacgccctagtt
tctcaacacaaaagagatgcagaagattttaaaaaaaagtttaatctatcccatatcgta
gtagagttaacaaaagaaaaactagaggatatagacatagatgcacaaagagctgctgaa
aagatatatagattattgtccaatcccatttcgattttagaggaaaaaccagtagagaaa
aagccttttatactagttaccaatcctgacattttttactactctatattttatcttttc
aattcattagataaacgcaatgttgctcaagagtttatgatagattttaattacattatt
attgatgagttccattattataatgcaaaacaatttgccaactttctttattttattatt
ctttcttacaagtttggtttttttgaaaagcagaacagaaaaatagttattctcacagct
acccccgatcttcagtttagagagttcatatgcaaattgaaaaaactcaatattaggata
aaagaaatagaaccgaaagtatttcctggcaagccgtctacaccggtattgagtgagctt
gtattgaatctttttcctttacaaaagttatcagattttccacggaaaattgagtatttt
ctagatttaataaaacaaaatatcagggaagataaagatggattgataatatctagtagc
ctcaggaatataaatataatagccaaaaatttaaactcttcctctatcaaggatagatat
gctcgtattacgggccccataaaccgagaggaacgagaaaaagccagttttaaaccttta
attttagcaactccgactgtggatataggctacaacttcgtcggaagacaaaaagaaaga
caaaatatagattttggatatttcgatgcaaaatatattgatcaattctggcaacggcta
ggaagaataggaagagtacttggaaaaccaattcataatgaagtctcgtatgcatatgct
tttattcccgaagaggcttacctactcatacaacaaaaactaaattcctataactataaa
agaaacgaattcaagcaatcttttgaagaacaacttaatggattaatgaggagggattta
aatactgaatacatttcttatttttccctattagaagtcatgcttcctataaagaacatt
ttagaaataaccccaaatgatttaaaagactttatcgaagaaacatttgaaactattaaa
catgtatatagtcctaaatctaaaaggagtttcaggagtttatacaatgaaataaaagaa
tttcaaaatattaaaaaagtcttaaaagacttagagataaccccttgtcagttaaaaaat
aatgaatctcaaacacttcttcaagagaaatacggtacaaattttacaatagctaaacag
ctaatagaaaatggggataacgagataaagaaagagttcatgttttttctcagaaataaa
attgcaaagtatgatgctatgtttaagtttagagacaatcaaatagatatctctgtttca
gtttacgatccttatagtttaataagtgaaagtaaagattatgtccttcttgattttctt
cacctaattagaaactttgatttcgagctatttgatgacaaaaacgatgctttcaaaaaa
acaaggagagagccgcctgaagcagaactttatgttattgctaaagatattctccctcaa
cctcgtatcataagaatagcatatagtcttccggaatatatgaattttgaagattatgat
aatgagctagtaggagattttatatctttaaataacctgatgatattaggatttaaaaag
gactttaaaggagaagatcttgtaccattgccaagagagataagtatggcaatatatgat
aaattcgttacggggatcatccttcctaaaaattttaatccatccataatctacaaatgc
ataaataatgagttttatccttttgaattagaagtcacctctaatggcaaatcaaaactt
tatcttttcttcatgggaatcgatgcacataaatttttttcaaagtatggttggagttta
aaaaaattaaattcaactgtgtttatagcttag

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