Methylacidiphilum caldifontis: IT6_08250
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Entry
IT6_08250 CDS
T09436
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcao03021
]
IT6_08250 (nusA)
03009 Ribosome biogenesis [BR:
mcao03009
]
IT6_08250 (nusA)
Transcription machinery [BR:
mcao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IT6_08250 (nusA)
Ribosome biogenesis [BR:
mcao03009
]
Prokaryotic type
rRNA transcription factors
IT6_08250 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
S1
HHH_5
KH_NusA_C
KH_SLS1_1
MRP-S35
LAMB4
Motif
Other DBs
NCBI-ProteinID:
QSR88360
LinkDB
All DBs
Position
complement(1778802..1780124)
Genome browser
AA seq
440 aa
AA seq
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MICKSGNSRRFPLFSLKIKEKAMNQEVLAIMEYMEKEKGINRQVFIEAMQSALLAAAKKS
IGPARDLRVEIHPKTGRINVRAKLEVVEKVKNSHDQISIKKAREIDPNVNVGDFIEVEVT
PKDFGRIAAQVFKQTINQALKGIERKMVLSEFKDRINTIVSGTIRRIERSDIIIDLGRYE
GIMPFKERVPTEEYVVGERIKAYVLSVEDTPHGPTIILSRSHPNFILRLLELEVSEVADK
IVEVKAIAREPGFRTKIAVWTNNPKIDPVGSCVGVRGARVKNIVRELHSEKIDLFKWSPN
VEELTIEALKPARVKKVELDRENHRVKVTVDEENYSIALGKKGKNTWLASKIVGWDIDVV
KEPSSVVDNFSQKIAKAAEEMASSLAIDQSVAEQIVRAGFINPEAVAESEEEDLMSALPE
LDPQLIHRLKEAAHLVGKTN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgatatgtaaaagtggaaactcaagaaggtttccacttttttctttaaaaattaaggag
aaagccatgaatcaggaagtcctagccatcatggaatacatggaaaaggaaaaagggatc
aacaggcaggtttttattgaagcgatgcagtcggctttgcttgcagcagcaaaaaaaagc
atcggccctgccagagatcttagggtagagattcatcccaaaacaggacggattaatgtt
cgggcgaaacttgaagtggtagaaaaagtcaagaatagtcatgatcaaatttccatcaaa
aaagcgagggaaatcgatcccaatgtaaatgttggcgactttatcgaagtagaagttact
cccaaggattttggacgcattgcagctcaagtctttaagcaaacgattaatcaggcttta
aaaggtattgaaagaaaaatggtcttatccgaattcaaagaccgcatcaacactattgtc
agtgggacaatacgaaggatagaaagatccgatatcattatcgatttaggaagatatgag
gggataatgccttttaaagaaagagtacctaccgaagaatatgttgtaggagaaaggata
aaagcttatgtcctgtcagtcgaagacacacctcatgggccgacgattatcctttcccgt
agccatcccaattttatactccgtctgcttgaactagaggtaagtgaagttgctgacaag
atcgttgaagtaaaagctattgccagggaacctggattccgtacaaaaatagctgtttgg
actaacaatcctaaaattgatcctgtgggttcatgtgttggtgtgcgtggagcacgggtc
aagaacattgttagagaacttcatagcgaaaaaattgatctgtttaagtggtctccaaat
gttgaagaactcaccatcgaggctctcaaacccgcaagagtcaaaaaggttgaattggat
cgagaaaatcatcgtgtaaaggtaaccgtcgatgaagaaaattattccatagctcttggt
aagaaaggaaaaaatacatggcttgcttccaaaattgtgggctgggatatcgatgtcgtc
aaagagccttcttcggtagtggataactttagccaaaagattgcgaaagctgcagaagaa
atggcctcttctttagctatagatcaaagtgtagctgagcagattgttcgggctgggttc
ataaatcctgaagccgtagcggaaagcgaggaagaagatcttatgtccgctcttcctgaa
cttgatcctcaattaattcatcgtctaaaggaagcagctcatcttgtaggaaaaacaaat
tga
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