Methylacidiphilum caldifontis: IT6_08325
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Entry
IT6_08325 CDS
T09436
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao00541
Biosynthesis of various nucleotide sugars
mcao01100
Metabolic pathways
mcao01250
Biosynthesis of nucleotide sugars
Module
mcao_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IT6_08325 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mcao01005
]
IT6_08325 (rfaD)
Enzymes [BR:
mcao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IT6_08325 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mcao01005
]
Core region
IT6_08325 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
DyP_N
Glycos_transf_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QSR88375
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Position
1792886..1793815
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AA seq
309 aa
AA seq
DB search
MGKKIVVTGGAGFIGSNLVLELLNQLSEIEVVVIDDFSSGSFKNILNAHCDIITENLYRF
DWSDYFSKKEIEVVFHLASLTDTTILDERRQMQNNVEAFRSLLRFFSGTSTKIIYASSAA
IYGMRSGKNRLQDDPQPANPYGFSKLQMERIATAYMKENPQTRITGLRYFNVYGPREAHK
KSASSMIFQLAKQIKEGKNPRLFSYGEQKRDFVYVADVVRATLLTAIKDCPLPLFNVGSG
HARSFNDIVHILNQTLKTDAKPEYFPCPYSFYQSHTEADLELTQKHLGYVSKYSLEQGIA
EYFDSGWLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaattgttgttacagggggagccggttttatcggttctaatcttgtttta
gaacttttaaatcagctttcagagattgaagtggtggttatagatgatttttcaagcggt
tccttcaaaaatattcttaatgctcattgtgacattattaccgaaaatctttatcgcttc
gattggtcagattatttttctaaaaaagaaatcgaagtggttttccatttagcttccctt
acagatacaactatactcgatgagcgcaggcagatgcaaaataacgtggaagcttttcgg
tccttgctccgttttttttcaggaacttctacaaagattatctatgcttcttctgcagcg
atctacgggatgcgttcgggaaaaaatcgcctacaagatgaccctcagccagcaaatcca
tatgggttttccaaattgcagatggaaagaattgctacggcttacatgaaggaaaatcct
caaaccagaataactgggctgaggtatttcaacgtatatggtccaagggaagctcataag
aaaagtgcttcaagtatgatttttcaattagcaaaacagattaaagaggggaaaaaccct
agacttttttcttatggggaacagaagagggattttgtttatgttgctgatgtggttaga
gcaacccttttaacggcaataaaggattgtcctctacctttattcaatgttggaagtggt
catgctcgatctttcaatgatatcgttcatatcttaaatcaaacattaaagacagatgct
aagcctgagtatttcccctgtccttattctttttatcaatcgcatactgaagctgacctg
gagttgactcagaagcatctgggatatgtttcaaaatattctttagaacaagggattgcc
gaatatttcgactcggggtggctcttataa
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