Methylacidiphilum caldifontis: IT6_09430
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Entry
IT6_09430 CDS
T09436
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mcao
Methylacidiphilum caldifontis
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcao03000
]
IT6_09430
Transcription factors [BR:
mcao03000
]
Prokaryotic type
Helix-turn-helix
Other families
IT6_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
HTH_30
HTH_23
HTH_29
HTH_28
Xre-like-HTH
AAA_7
PhnI
MCM
Motif
Other DBs
NCBI-ProteinID:
QSR88571
LinkDB
All DBs
Position
2034236..2036218
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AA seq
660 aa
AA seq
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MNDIIQEWENFTLGNGVQPRVRNDILKSWERCKKYGVDVEKHSPLLLPSQEENLNLDIDS
FSFLQPLFPLLRMQALDFDCLIAITSSEGVVSFVDGPERFLEKANFYKLVIGANWSEKYC
GCTAIGAAIEEKKPVTVIGPEHYCASLHDIWCTSAIIHKPESKELFMALTMIGDLAHKPI
PISVAITNSSLIESKLATVLYADRAYLYSWFIEKKGLYRTSPFLLIDSLGTILHCTKEIL
AEFQATPLELVVIRNRPRSVFNQPKVFESDIVLGKTVITALIEPILNQNRIIGYLIELPH
SFSGASSGRNVKTLDFSYISSKSQKPSTETQVTVSADSIIGKSTAFVAAIEEAKVAAQND
LPVLLLGETGTGKEVFAKFIHQKSRRSKETFLAINCAAIPKELVVSELFGFEGGTFTGSS
KEGRKGKFLLANYGTIFLDEIGELPLEIQGTLLRVLEEFEIFPIGAKNPIPVDVRVIAAT
NKDLNLLSQKGLFRKDLFYRLNIFPIYLPPLRDRGKDIELLFMYFVEQISKKLQFSPPID
WDGILPVLYSYSWPGNVRELKNVAFRLIAKNLQNKLIKSTDLLSILNSAANETQESRLPH
EQNQNEMKLSFDTNLLHYKKHKKELIVSALEKSGGNMSVAAKLLGVHRSTLYRNLKKFSS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacattattcaagaatgggagaattttaccttgggcaatggggttcaaccaagg
gttagaaatgacattttgaaaagctgggaaagatgcaaaaaatacggtgttgatgttgaa
aaacactcgcccttgcttcttccttcacaagaagaaaatcttaacctagacatagattca
ttttcttttcttcaacctctatttcccctgcttcgaatgcaggcactcgattttgattgt
ctgatagccatcaccagttctgaaggagtggtgagttttgtcgatggaccagaaagattt
ttagaaaaggcgaatttttataagttggttattggagccaattggagtgaaaaatattgc
ggttgtacggctattggagcggcaatcgaagaaaaaaagcctgttacggttattggtcca
gaacattattgtgcttctcttcacgatatatggtgtacttctgcaattattcacaaacct
gaatcgaaagaactttttatggctttaacgatgattggcgatcttgcacacaaacccatc
ccgatcagtgtggccataaccaacagttctcttattgaaagcaaacttgcaacagtcctt
tatgcagatagggcttatctttacagttggtttatagaaaaaaagggactttataggact
tctccctttttgctcatcgattcattaggaaccattttacattgtacaaaagaaattcta
gctgaatttcaggccaccccgttagaactcgtagttattagaaatagaccaagaagtgtt
tttaatcagcctaaggtatttgaatctgatattgttcttggaaagacggtcattaccgct
ctgattgagcctattttgaatcaaaacagaattattggatacctcatcgaactgcctcat
agcttttctggggcttcttctgggagaaatgtcaaaaccttggatttctcctacatttca
tctaaatctcaaaaaccgagtactgaaacacaggttacggtttctgctgattcgattatt
ggtaagtctaccgcttttgtagctgcaattgaggaagccaaggttgcagctcaaaatgat
ttgcccgttcttctcttaggtgaaacgggtaccggaaaagaagtttttgccaagtttatt
catcaaaaaagccgaagatcaaaagaaacttttttagcaattaattgtgctgccattcca
aaggaattggtggtgagtgagctatttggatttgagggggggacttttactggctcttct
aaagaaggaagaaagggaaaatttcttctagccaattacggaacaatttttctcgatgaa
attggagagcttcctttagagattcagggcacacttcttcgtgtccttgaagagtttgaa
atttttccaataggagctaaaaatcccattccagtagatgttagagttattgcagcgact
aacaaggatcttaatttgttaagtcagaagggattatttagaaaagatcttttttacaga
ttaaacattttcccaatttatcttcctccattaagggatcgagggaaagatattgaattg
ctctttatgtattttgttgaacagatctctaaaaaattgcaattttctccacctatcgat
tgggatggaattttaccggtcctttattcctattcttggcctggtaatgtaagagagcta
aagaacgttgcttttaggcttattgctaaaaatcttcaaaacaaactgattaaatcaact
gatctgctttccattttaaatagtgctgctaatgaaactcaagagagccgattgccccac
gaacagaatcagaacgaaatgaagctatctttcgatacaaatcttcttcattataagaag
cataaaaaagagctcatcgtttctgcattggagaaatcaggggggaacatgagtgtagct
gcaaaattgctaggagtacaccgcagtacgctttataggaatctaaaaaaattctcatca
taa
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