Mycoplasma capricolum subsp. capripneumoniae F38: MCCPF38_00402
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Entry
MCCPF38_00402 CDS
T03703
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcap
Mycoplasma capricolum subsp. capripneumoniae F38
Brite
KEGG Orthology (KO) [BR:
mcap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcap03016
]
MCCPF38_00402 (truB)
Enzymes [BR:
mcap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MCCPF38_00402 (truB)
Transfer RNA biogenesis [BR:
mcap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCCPF38_00402 (truB)
Prokaryotic type
MCCPF38_00402 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6883
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
CEA11767
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All DBs
Position
1:409693..410289
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AA seq
198 aa
AA seq
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MNNATKISDYLLNANKAYQVKIKLFTLTDSYDGEGNIIQTQIPFDISLDQINKVISKYNN
YSYEQYPPIYSYIKVNGKKLYQYALANQDVEIKSRKVTIFKTKLLNYDQKNYEIFLDVKC
SKGTYIRSLAVDICKDLNTIGYVVELNRTLSGNFDINSAIDIKDLSWKDLISIDDAVKIN
DFKVVKYHNILDIKQGKK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgaataatgctactaaaattagtgattatttattaaatgctaataaggcttatcaagta
aaaattaaattatttacattaactgatagttatgatggtgaaggaaatataattcaaact
caaattccttttgatattagtttagatcaaataaataaagtaattagtaaatataataat
tattcttatgaacaatatccaccaatttattcatatataaaagttaatggtaaaaaactt
tatcaatatgctttagctaatcaagatgttgaaataaaaagtagaaaagtaactattttt
aaaactaaattattaaattatgatcaaaaaaactatgagatttttttagatgttaagtgt
agtaaaggaacttatattagaagtttagctgttgatatttgtaaagatttaaacacaatt
gggtatgtagttgaacttaatagaaccttatctggtaactttgatataaatagtgcaatt
gacataaaagatttaagttgaaaagatttaatttcaatagatgatgctgttaaaattaat
gattttaaagttgttaaatatcataatattttagatattaaacaaggaaaaaaatag
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