Mycoplasma capricolum subsp. capripneumoniae F38: MCCPF38_00906
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Entry
MCCPF38_00906 CDS
T03703
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mcap
Mycoplasma capricolum subsp. capripneumoniae F38
Pathway
mcap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCCPF38_00906 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcap03400
]
MCCPF38_00906 (uvrB)
DNA repair and recombination proteins [BR:
mcap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCCPF38_00906 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MCCPF38_00906 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_7
DUF2009
AAA_30
P-loop_SecA
DPPIV_rep
AAA_25
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CEA12244
LinkDB
All DBs
Position
1:899546..901543
Genome browser
AA seq
665 aa
AA seq
DB search
MFIANNKYKLVTKYKPSGDQNQAIEKLNKGLIENKKHQVLLGATGTGKTFTIANIIAKHN
KQALVIAHNKTLAMQLYYELKEMFPENRVEYFVSNFDFFQPEAYIPSKDLYIDKDSRQNM
ELDMMRLSACNALLTRNDTIVVASVAALFALQNPLEYSSAFIELKVGQKIKRNELLTWLV
RSGYTRNDIENQLGSFSAKGDVVKIVPGWVNNIMFRISLFDDEIESIHTLNTITNSILDN
ITTVTIHPAQSYITPQDKLKTICNNIRNELVQRLAELQSENKLLEAQRLEQRTKYDLESL
EEFGFCSGIENYSSHLDFRSKGQRPYVLLDYFNNDFITIIDESHITLPQIRGMYNTDRSR
KLTLVEYGFRLPSALDNRPLNFDEFNSLIKQVIYTSATPGDYELDLVNHQVIQQIIRPTG
LLDPQIEIRKTTNQIDDIINEIHLRKLQNERVFITTLTIRMSEDLTAFLQEKNIKVAYLH
SELKTLECSEILNDLRKGVYDVVVGVNLLREGLDLPEVSLVCILDADKQGFLRNYRSLIQ
TIGRVARNVNGKAIMYADTVSQAMDEAIKETNRRRRIQEEFNKKHNITPKTISKAISESI
LSEQTKKTLAKAKKIKDKKQKLQTIQQTIDTLRQEMLQAAKELDFERAAILRDTIIELEN
EKNTN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtttatagcaaataataagtacaaactagtaactaaatataaaccttcaggcgatcaa
aatcaagctatagaaaaattaaataaaggacttatagaaaacaaaaaacaccaagtgtta
ttaggagcaacaggtactggaaaaacttttacaatagcaaatattattgcaaaacataat
aaacaagctttagtcattgcacataataaaactttagcaatgcagctttattatgaatta
aaagaaatgtttccagaaaatagagttgaatattttgtttcaaactttgatttttttcaa
ccagaagcttatattccttcaaaagatttatacattgataaagattctagacaaaatatg
gaattagatatgatgcgtttaagtgcttgtaatgctttattaacaagaaatgatactata
gtagtggctagtgttgctgctttatttgctttacaaaatccattagagtattcttcagct
tttattgaattaaaagttggtcaaaaaattaaaagaaatgaattattaacctgactagta
agatctggatatactagaaatgatattgaaaatcaattgggaagcttttcagcaaaaggt
gatgttgttaaaattgttcctggttgagtaaataatattatgtttagaatttcattattt
gatgatgaaatagaaagtattcatactttaaatacaattacaaattctattttagataat
attacaactgttactattcatcctgctcaatcatatataactccacaagacaaattaaaa
acaatttgtaataatattagaaatgaattagttcaaagattagctgaattacaatcagaa
aacaaacttttagaagctcaaagattagaacaaagaactaaatatgatcttgagtcactt
gaagaatttggcttttgtagtggaattgaaaattattcttcgcatttagattttagatct
aaaggtcaaagaccatatgttttattagattattttaataatgattttataactataatt
gatgaatctcatatcacacttcctcaaattagaggaatgtataatactgatagatcaaga
aagctaactctagttgaatatggttttagactaccatcagctttagataatcgtccttta
aattttgatgaatttaatagtttgataaaacaagtaatttatacttcagcaacacctgga
gattatgaactagatttagttaatcatcaagtaattcaacaaattattcgtccaactgga
ttattagatccacaaattgaaataagaaaaacaaccaatcaaattgatgatattattaat
gaaattcatttaagaaaattacaaaatgaacgtgtatttattactactttaactattaga
atgagtgaagatttaactgcttttttacaagaaaagaatattaaagttgcttatttgcac
tcagaattaaaaactctagaatgtagtgaaattttaaatgatctaagaaagggagtttat
gatgttgttgttggagttaacttattaagagaaggattagatctacctgaagttagttta
gtatgtattttagatgcagataaacaaggttttttaagaaattaccgttctttaattcaa
actattggtcgtgttgctagaaatgttaatggtaaagctattatgtatgctgatactgtt
agtcaggcaatggatgaagcaattaaagaaactaatagaagaagaagaatccaagaagaa
tttaataaaaaacataatattactccaaaaactatttcaaaagctattagtgaatctatt
ttaagtgaacaaactaaaaaaacattagctaaagctaaaaagattaaagataaaaaacaa
aaacttcaaactattcaacaaactattgatactttacgccaagaaatgttacaagctgca
aaagaacttgattttgaaagagcagcaattttaagagatacaattattgaattagaaaat
gaaaaaaatacaaattag
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