Mycoplasma capricolum subsp. capripneumoniae ILRI181: MCCPILRI181_00656
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Entry
MCCPILRI181_00656 CDS
T03704
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
mcar
Mycoplasma capricolum subsp. capripneumoniae ILRI181
Brite
KEGG Orthology (KO) [BR:
mcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcar03032
]
MCCPILRI181_00656 (hup)
03036 Chromosome and associated proteins [BR:
mcar03036
]
MCCPILRI181_00656 (hup)
03400 DNA repair and recombination proteins [BR:
mcar03400
]
MCCPILRI181_00656 (hup)
DNA replication proteins [BR:
mcar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MCCPILRI181_00656 (hup)
Chromosome and associated proteins [BR:
mcar03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MCCPILRI181_00656 (hup)
DNA repair and recombination proteins [BR:
mcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MCCPILRI181_00656 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_bac_1
HU-CCDC81_euk_2
Shigella_OspC
Motif
Other DBs
NCBI-ProteinID:
CEA11015
LinkDB
All DBs
Position
1:complement(682065..682337)
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AA seq
90 aa
AA seq
DB search
MTKKELIEEIIINENISKVDAEKVVNRIFQTISKHLIEGKEVSVAGFGKFVISERSSREG
VNPSTGEKIIIPASRSARFKPAKQLKESLM
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaagaattaattgaagaaatcattattaatgaaaatatttctaaagttgat
gctgaaaaagttgttaatagaatctttcaaacaatttcaaaacacttaattgaaggaaaa
gaagtatcagttgcaggatttgggaaatttgttatttctgaaagatcatctagagaagga
gttaacccatcaactggtgaaaaaataattattccagcttctagatcagcaagatttaaa
ccagctaaacaacttaaagaatcattaatgtaa
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