Moraxella catarrhalis 25239: MC25239_00376
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Entry
MC25239_00376 CDS
T03381
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03410
Base excision repair
mcat03430
Mismatch repair
mcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MC25239_00376 (recJ)
03430 Mismatch repair
MC25239_00376 (recJ)
03440 Homologous recombination
MC25239_00376 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_00376 (recJ)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MC25239_00376 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MC25239_00376 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MC25239_00376 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
PIGA
Motif
Other DBs
NCBI-ProteinID:
AIT42817
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Position
421990..423759
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AA seq
589 aa
AA seq
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MVYQDSQKTLTLSPRLTEPLNQALRDQLDSSTLARVLQARGVHDISQIDTHICQLLAAAD
LMGIDTAVTLIDTAIDQGERILIVGDFDCDGATSTALMVRVLRQMGALVDFLVPDRFKFG
YGLTPQIVEHGAALYRPNLIITVDNGISSHDGVATAHQMGIKVVITDHHLTTKPSPPADA
VVNPNQLGCHFGSRYLVGVGVAFYVMGRLAKHRRQLGKSSASVAKYLDLVALGTVADLGV
LDKNNRILVTHGLQLIRQGRCVVGILAILEQAGRQYQTITSDDFGFAIAPRINAAGRMDN
MRIGVECLLTDDWGEAHRLAIKLNQLNQSRRHVEMSMKDDAIAIVQSLSEFDETPPKGIV
LYQDDWHQGVIGIVAGRLKEKLYRPSIVFAPADTALVGKSDDIKGSARSIAGIHIRDVIE
SVALAHPDLIKHFGGHAMAAGLTIQKADFERFNQALQAVLLDFDDDVFYEQKFTDGALLP
DEFSLSFVDRLKNISVWGNGFVPPVFDGKFEVINHRILKDKHLKLSLKMAGVQYPIDAIW
FNYQADSWDYRAFGVHILYTLDINEWQGSQSLQLVIKDLAVMSVAALSV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatcaagattcccaaaaaacactcacacttagcccaagattgaccgagccactc
aatcaggcactgcgtgatcagctggactcatcaacacttgcacgagttttacaggctagg
ggtgtacacgatatcagccaaatagatacgcacatctgccagctgcttgcggcagcagat
ttgatgggtattgatacagcggttacgctcattgataccgccattgaccaaggtgagcgt
attttaattgtcggtgattttgattgtgatggggcaaccagtacggcattgatggtgcgt
gtcctgcgacaaatgggcgctttggtggattttttggtgcctgaccgatttaagttcggc
tatggactgacaccgcaaattgttgagcatggtgctgcattgtatcgcccaaacttaatc
atcacggtggataatggcatctcaagccatgatggtgtggccactgcccatcagatgggg
atcaaggtggtgattaccgaccatcatttgaccaccaaaccatcaccgcctgccgatgct
gtggtcaatcccaatcagttgggttgtcattttggtagtcgctatcttgttggtgtgggt
gtggcgttttatgtgatgggcaggcttgccaagcatcgccgccaactgggcaaatccagt
gccagcgtggctaagtatttagatttggttgctctaggcacagtcgcagaccttggtgtg
ctggataaaaataaccgcattttggtcacgcatgggctgcagctgatccgtcaaggtcga
tgcgtcgtgggcattttagccatcttagagcaggcaggtcggcaatatcagaccatcacc
agtgatgattttggatttgccatcgcacctaggattaatgccgctggacggatggataat
atgcgtattggtgtggagtgtctacttactgatgattggggagaggcacaccgattggca
attaagcttaatcagcttaatcaatctcgccgccatgttgagatgagcatgaaagatgat
gccattgccattgtccaaagtttatctgagtttgatgagacaccgcctaaaggcattgtg
ctttatcaagatgactggcatcaaggggttatcggtattgttgcaggtcgcctaaaagaa
aaattataccgtccaagcattgtttttgcaccagcagataccgcattggttggtaagtca
gatgatatcaaaggctcagctcgttctattgcaggcatacatattcgtgatgtcattgaa
agcgtggcattggctcatcctgatttgatcaagcattttggcggtcatgcaatggcagca
ggcttgaccattcaaaaggctgattttgaacgatttaatcaagcactccaagcggtactg
ttggattttgatgatgatgtattttatgaacaaaaattcaccgatggagcgttattgcct
gacgagtttagcctaagttttgtggatagattaaaaaacatcagcgtttggggcaatggt
tttgtaccgcctgtttttgatggcaagtttgaggtgattaaccatcgtatcttaaaagat
aaacatctaaaacttagcctaaaaatggcaggggtgcaatatccgattgatgcgatttgg
tttaattatcaagcggacagttgggattatcgagcgtttggcgtgcatattttgtatact
ttggatattaatgagtggcaaggcagccaaagtctgcagctggtgattaaggacttggcg
gtgatgagtgtggcggcattgtctgtttag
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