Moraxella catarrhalis 25239: MC25239_00931
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Entry
MC25239_00931 CDS
T03381
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MC25239_00931 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_00931 (recB)
Enzymes [BR:
mcat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MC25239_00931 (recB)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MC25239_00931 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
DEAD
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIT43353
LinkDB
All DBs
Position
1020393..1024340
Genome browser
AA seq
1315 aa
AA seq
DB search
MTDTILTMPPTPPKPSEQIAALQCTLEQAYLIEASAGTGKTWTLTGIILRLLIEKKYPPE
RIIATTFTRAAAAEMQERISERLHSFYGLMRWLQGMLSTQPEWFNQAAPIEQIITYANQA
GYDAADPINEHLLKFILSQQATFLNEVVYRTGLLLTSLDKLFVGTLDSLAQKWLNEFAAQ
IGHQSGMEILNNAEQKVAAIVHDEMRAEEVRLKHAQPEFYQIFKAFYPNFFSQVDAVVKI
VNKAINFYSAPIDELMPINTDISLVKAMIDQIITTDFTGFTPYFDANFRKQVAMNQSLGF
GKLIQYLPNLLSLIQKHGVLFVRFVDNDALKLIDAIIKAMDKDWQIFNKSANPSDINQFL
ALPLQALSDIANVYLTLSEQTNLYHTHICRHIILSAKSQIAQRLETHGQTTFTLQMVRLN
EALRNSPALARQIRHHYPVALIDESQDINGLQVELIELVYLNEIANYHKNLIRYEQIGGE
KPKLPRGFLLLVGDPKQAIYRFRGGDVTNYNLIKHYGNQDLLIKAPLMNQSLSLTVNRRS
SKALIEALNAWFDNNHQDAVANHANLGQGIFYQQIQAHKDGGGIHWQSDAYADYYGKYPI
AVLHFDHIEAGQKAAQRAEQIARHINTILQGDHTLHGQKILPKDIAVLGRTADTLDRIKS
ELDQLNIPAIIPKEMNIFITQAADDLLALIGAILQPNHSENLGKFLVSSLVGMTLKQAIN
IIEPNDQQALDNDLSETQNLKTHLLAYLKKSYEKWQKFGVSSALAYALHHSPIDYDDDKS
PWLKAATQGERYLVDLERLVALVSEQSQLHEMRIIAWYHKQMNADVDSHNKRPILPSESG
VNLMTIHKSKGLEFPIVYVIGMDEKPKNENGLTIYPYTNHNFQRCLSLSQGNLIDENYYY
HINQQELIDEIRRLGYVALTRASEQLYIVGGDLSKKTSKEMPLYQWLDCAGEKILSLPDR
LKGWVDWIDLTEADLFSQPYQTKLPNLSAKHYAPWDMVMTKTQFFGEYKTSFSALITRLD
KSAISPDEADIDQLSVLTDMAASDQFDDIRTSFFKGSLAGDFLHKVMQFLPTDRLALASL
HDAHRIISGVIYEQGRKLGIAERYLPTRPAQQIGTRINSNEHQADDHTKLVAWIYQLAYA
PFRASHRSLMSLPMTVQLRELSFTLGLGDTFSITRLNEVFKAHSDKDLVLLDDDYHTMRY
RYLRGEIDLVYECDRRFFIVDYKSNYLGSTADEYHDHAMAAVMDKVGYWLQAAIYQVALH
RLLKIRLKDYVGNEAAYLGAVEYVFLRGVQEGNEKTGHLCWQPPLSLILALDEIL
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccatcttgacgatgccaccaacaccgcccaaaccctctgaacaaattgcc
gccttacaatgcacgcttgagcaggcttatttgattgaagcttcggcaggtacaggcaaa
acttggacgctgacggggattattctacggctattaattgaaaaaaaatatccgcctgag
cgtattattgccacaacttttactcgggcggcggcagctgagatgcaagagcgtatcagt
gagcggctgcacagcttttatggcttaatgcgttggttgcaaggtatgctaagcactcag
cctgagtggtttaatcaggctgcacccatagagcagattattacttatgccaatcaggct
gggtatgatgccgccgatccaattaatgagcatttactcaaatttatcctatctcagcaa
gcaactttcttaaacgaagtggtttatcgcacagggcttttattaacttctttagataaa
ctatttgttggtacgctagatagtcttgcacaaaaatggctcaatgaatttgccgcccaa
atcgggcatcagtctggcatggagattttaaataatgccgaacaaaaagttgccgccatc
gtccatgatgagatgcgtgccgaagaagttaggcttaagcacgcccagcctgaattttat
caaatctttaaagcattttatccaaattttttcagccaagtggatgctgttgtcaagatt
gttaataaagcgattaatttttattctgcacccattgatgagcttatgcctattaataca
gacataagcttggtcaaagcgatgattgatcaaattataacaacagattttacaggattt
acaccatattttgacgccaattttcgcaaacaagtagcaatgaatcagagtttaggcttt
ggcaaactgattcaatatctgccaaatttgctgtctttaatccaaaaacacggcgtgcta
tttgttcgttttgtggataatgatgcacttaagctgattgatgcaatcataaaagcaatg
gataaagattggcaaatttttaataaaagtgccaacccaagcgatatcaatcaatttttg
gcgttgccacttcaggctctcagcgatattgccaatgtttatttgacgctaagtgaacaa
accaatctataccatacgcacatctgccgacacattatcctaagtgcaaaaagtcagatt
gcccaaaggcttgagacacatggtcagaccacatttacactacaaatggtaagattaaat
gaggcacttcgtaatagtcctgcactggcacggcagattcgccatcattatcctgtcgct
ttgattgatgaatctcaggatattaatgggctacaagttgagctgattgagctggtttat
ctcaatgagattgccaattatcacaaaaatcttatccgctatgagcaaatcggtggcgag
aagccaaaactgccacggggatttttattgttagttggagatcctaagcaggcaatttat
cgctttcgtggtggcgatgttaccaattataatttaattaagcattatggcaaccaagat
ttgctcatcaaagcaccattgatgaatcaatcgctgtctttgacggtcaatcgccgttca
agcaaagcactgattgaggcactcaatgcatggtttgacaataatcatcaagatgctgtc
gccaatcatgccaatttaggtcaagggattttttatcagcagatccaagcacataaagac
ggtggcggtatccattggcaatctgatgcttatgccgattattatggtaaatatcccata
gcggtgttgcattttgaccatatcgaagctggtcaaaaagctgcacaaagggctgagcaa
attgctcggcatatcaataccattttgcaaggtgatcatacgctacatggtcaaaagata
ctgccaaaggatattgctgtacttggacgcacagctgatacgctagataggataaaaagt
gaacttgatcagctcaatatcccagccatcattcccaaagagatgaatatctttatcact
caagctgcagatgatcttttggcgttaattggtgcgatactacaaccaaatcacagcgaa
aacttgggtaaatttttggtatcaagcttggttggcatgacgcttaagcaagcaataaat
atcattgaaccaaatgatcagcaggctttggataatgacttatcagaaactcaaaatcta
aaaactcatcttttagcctacctaaaaaaatcatatgaaaaatggcaaaaatttggtgta
tcatcagcacttgcttatgcgcttcaccattcgcccattgattatgatgatgacaaatcg
ccttggcttaaggcagccactcaaggcgagcgttatttggtggaccttgaacggctggtg
gctttggtcagtgagcaatcgcagctgcacgagatgcgtatcattgcttggtatcataaa
cagatgaacgctgatgttgatagccacaataagcgtcccattctaccgagcgaaagcggt
gttaatttgatgactattcataaatcaaaagggcttgaattccccatcgtgtatgtcata
ggcatggatgaaaagccaaaaaatgaaaatgggctgacaatctacccttatactaatcac
aattttcagcgatgcttaagcttaagccaaggtaatttgattgatgaaaattattattat
catatcaatcagcaggagttgattgatgaaatcagacgcttaggctatgtggcattgacg
cgtgcttctgaacagctatatatcgtgggtggtgatttatccaaaaaaacttcaaaagaa
atgcctttgtatcaatggcttgactgtgcaggtgaaaaaatactgagcctaccagatcgg
ctaaaaggttgggtggactggatagatctgactgaagcggatttatttagccaaccttat
caaaccaagctgcccaatcttagcgccaaacattatgcaccttgggatatggtgatgacc
aaaacccagttttttggagaatataagaccagctttagtgcattaattactcgcttggat
aagtctgccatttctcctgatgaagcagatattgatcagttgtctgtactgactgacatg
gccgcatctgatcagtttgatgacattcgtaccagcttttttaagggcagtttggctggt
gattttttgcataaagtcatgcaatttttaccgacagatcgactggcattggcatctttg
cacgatgctcatcgtatcatcagcggggtgatttatgaacaaggcagaaaacttgggatt
gctgagcgttatttacccactcgccccgctcagcagattggtacacgcatcaattctaac
gagcatcaagccgatgatcataccaagttggttgcttggatttatcagcttgcatacgca
ccttttagagcatctcatcgctcattaatgtctctgccaatgactgtacaactgcgtgag
cttagctttacactggggcttggcgatacctttagtatcactcgcctaaatgaggtgttt
aaagcacatagcgacaaagacttggtattgcttgacgatgactatcataccatgcgttat
cgttatttacgaggtgagattgatttggtttatgagtgcgataggcgattttttatcgtt
gattataaatcaaattatttgggtagcacggctgatgagtatcatgatcacgccatggct
gcagtgatggataaggtcggctattggctacaagctgctatttatcaagtggcattgcat
cgacttttaaagattcgattaaaagactatgttggcaatgaagcagcttatttgggtgct
gttgaatatgtctttttgcgtggcgttcaagagggcaatgagaagacagggcatttatgt
tggcagccgccattatctttgattttagcacttgatgagattttataa
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