Moraxella catarrhalis 25239: MC25239_00987
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Entry
MC25239_00987 CDS
T03381
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC25239_00987 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcat03019
]
MC25239_00987 (rhlB)
Enzymes [BR:
mcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MC25239_00987 (rhlB)
Messenger RNA biogenesis [BR:
mcat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MC25239_00987 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NTF-like
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIT43408
UniProt:
A0A3A9L1A7
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All DBs
Position
complement(1074337..1075512)
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AA seq
391 aa
AA seq
DB search
MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTAT
FLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITG
GSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDI
KRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVT
EREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQ
RFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFV
SENDAFNLPALERHIDQKFKLNQFEFLDEHK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacgactgttaaaaattttgatgatttaccactatccgagccaattttaaag
gcggtgcaagcattaaaatttgatcaattaacccccattcaagcacagattttgccacat
acattggcaaatcaagatgccattggacaggcacaaacaggcacaggcaagacagcgaca
tttttgattaccatcattgagtcgctgttaaagcgtccgtttcaagctgatgaaattcgc
tatcttggcgaacctagagcattggttttggcacctaccagagagcttgcacagcagatt
ttggcagattgccgtgaactgacccgatttagccagctttataatttgtgtattacaggc
ggctctgattttgataaacaacttgagcagttgcataaaagaccgctggatattttgatt
ggcacaccggggcgtatcatcgattgggttaataaaggcgagctttttttggatcgtgtt
gaggtattcgtgcttgatgaagctgatcgtatgttggatatgggttttatccctgatatc
aagcgtattgtcagacatatgccaagcaataccgaacgccaaagcctattattttcggca
acttttaatcaagatgtgatgaatctggcttatcgttggctacatcagccagcatttgtt
gagattgcacctgaaagtaaaaccaatcaggcgattgatcaacaattttatttggtcact
gagcgtgaaaaaacgagcgcacttaagcaaattttggcagatgattcggtgaaaaaaacg
atcatttttgccaatcgcaaagatcaagttaaacgcctatacgattatttgcgtcgtcat
cacaaggttacgatgctgtctggagatgtggctcagcaaaaacgagagcgttacttgcag
cgttttaaagatggcgaggtcaatgtactggtagcaaccgatgtggcagggcgtggcatt
catgtggatgatgtgacgcatgtgatcaattatactttacctgatatgcccgatgactat
gtgcatcgtatcggtcgtacagggcgagcgggtttgagtggtgtgtccatcagttttgtt
agtgaaaatgatgcctttaacttgcctgcacttgaacgacatattgatcaaaaattcaaa
ctcaatcaatttgagtttttagatgagcataaatag
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