Moraxella catarrhalis 25239: MC25239_01150
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Entry
MC25239_01150 CDS
T03381
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03030
DNA replication
mcat03430
Mismatch repair
mcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MC25239_01150 (dnaE)
03430 Mismatch repair
MC25239_01150 (dnaE)
03440 Homologous recombination
MC25239_01150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcat03032
]
MC25239_01150 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_01150 (dnaE)
Enzymes [BR:
mcat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MC25239_01150 (dnaE)
DNA replication proteins [BR:
mcat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MC25239_01150 (dnaE)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MC25239_01150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Imm42
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIT43564
LinkDB
All DBs
Position
1254986..1258708
Genome browser
AA seq
1240 aa
AA seq
DB search
MSFVHLGIRSEYAIIDSIVRIKDLVKAAVADGQDTLALADWNNMFAAVKFYKACIGAGIK
PIIGAEVVVGEHSDKDAADARHSVILYAMSHHGYQNLMRLISDAYTNRPMNNHGSVEFET
PVITKAALAEYSDELIAILTHRSEIAQPLLGNNPDNALPILQTWQDIFGDRLYIGIRRVK
ASDDKFNESAIIQAAKLGIAIIAHNDVRFIHASPTETNDKNNTVSTDFDAHEARVCIANS
YTLADDRRPREYTELQYFKSQKQMAELFADLPQAIKNTRLLASRCNVTITLGINVLPDFP
IPKGETIETFFKKVSADGLNRRLEKLYPVDQRDDDWDKVRKPYDERLDYELDIILKMGFP
GYFLIVMDFIRWAKANGVPVGPGRGSGAGSLVAYSLNITDLDPLSYDLLFERFLNPERVS
MPDFDIDFCIEGRDRVIDYVAQTYGRQAVSQIITFGTMAARAVVRDVTRVQGKPFGLGDR
ISKMIPKTPGIKLEDAFDQEPQLKELLTNPDAPDHELALEIWEMAKKLEGLTRNVGKHAG
GVLIAPNSISDFSAIYCDGEGHPVSQYDKDDVEAVGLVKFDFLGLRNLTVLQAAVDNINQ
TRQAQGQSSIDLETLPLDDADVYTSVLQEAKTSAVFQLESSGMKKYLAQLKPSNIEDVIA
MCALYRPGPLESGMVSDFIDRKHGIQEVAYPHPQFQHELLQPPLESTYGVIVYQEQVMQI
AQVLAGYTLGGADMLRRAMGKKKPEEMAKQRSTFVEGAIEQNIDGGLAAQIFDLVEKFAG
YGFNKSHSAAYGVLAYQTAYLKHYYPAEFMAAVLTSEMDDTDQVVFLLSDCRDNFGLTII
PPSVNHSQWKFVVRDAKTIVYGLGAVKGVGEEAVNSIVAARKDGAFKDLYDFCNRVDIKK
VGKRSLEALIKAGCFDILAETLKPHYITDHSDCSYQIRRGLWRQLPEAMAAADQNRQNQL
IGTMDLFTDVDDSLFVAPPLEDVYWQPQDRLRYEQATLGLYLTGHPLDEYRSELPLYTTV
KSVVDLKDTAKGFAWIAGLIYDVAFFGERIVVKLDDGKGRIEMSCYGETFNQFKEVLTAG
KRVLGIDEEYKPLYTKGERANMTIANIVIAKISVRENDDGRIFTRLHHIESIENARIRRL
KEIHLKLACDDTQALEGILSVIKENSPPPELIKRGSHPTSEHDDIDISQVGDLCVPLSLY
LYDECSVARIQTNDRLRLYPSDHNIAQLKNHITDDHLVFR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtacatttaggtattcgtagcgaatacgccattatagactcaattgtccgt
atcaaagatttggtcaaagccgccgtcgctgatggtcaagatacacttgctttggctgac
tggaataatatgtttgcagcagtcaagttttataaagcgtgtatcggcgctggtattaag
ccaatcattggggctgaggtggtggttggtgagcatagtgataaagatgcagctgatgca
cgccacagcgtcatcctttatgcgatgagccatcatggctaccaaaacctgatgcgtttg
atttcagatgcttataccaaccgcccaatgaataatcatggttcggtagagtttgaaaca
cccgtcatcaccaaagcggctttggctgaatattccgatgaattaatcgccatcttaaca
catcgctcagagattgctcagcctttacttggcaataaccctgacaatgccctgcctatt
ttacaaacatggcaagatatttttggcgataggctctacattggcattcgccgagtcaaa
gccagcgatgataagtttaatgaaagtgccatcattcaagctgctaagcttggcattgct
atcattgcacataatgatgtacgctttattcacgcaagcccaactgagacaaatgacaaa
aataataccgtcagtacagactttgatgcacatgaagctcgtgtgtgtatcgcaaatagc
tataccttagcagatgacagacgcccaagagaatacaccgaacttcaatatttcaaaagc
caaaagcagatggccgagctgtttgctgatttgccccaagcaattaaaaatacgcgccta
ctcgccagtcgatgtaatgtaactatcacgcttgggattaatgttctgcctgattttccc
atcccaaaaggtgagaccattgagactttttttaaaaaagtatccgctgatggcttaaac
agacggcttgagaaactttatcctgttgatcagcgagatgatgattgggataaagtacgc
aaaccttatgatgaaaggcttgactatgagcttgatatcattcttaagatgggttttcct
ggctattttttaattgtcatggactttatccgctgggcaaaagccaatggcgtacctgtc
ggtcctggtcgtggctcaggtgcaggctctttggttgcttattcgcttaatattactgat
cttgaccctttgagctatgatttgttatttgagcgattcttaaaccctgagcgtgtctca
atgcctgactttgatatcgatttttgtatcgaagggcgtgaccgtgtgattgactatgtg
gcacaaacatatggtcgccaagcagtcagccaaatcatcacctttggtacgatggcggcg
cgtgcggtggttcgtgatgtcacccgtgttcagggtaagccttttggtctgggtgatcgc
atctcaaagatgattccaaaaacacctggtattaagcttgaagatgcctttgatcaagaa
cctcaactcaaagagctgctgaccaatccagatgcaccagaccatgaattggctcttgag
atatgggagatggccaaaaagcttgaaggtctcacccgtaatgtcggcaaacatgcaggc
ggcgtactcatcgcacccaatagcatcagtgatttttcggccatctattgtgatggtgaa
ggtcatcctgtcagccaatatgataaggacgatgttgaagctgtcggcttggtaaaattt
gatttcttaggacttcgaaatttgaccgtacttcaagccgctgttgataacattaaccaa
actcgtcaagctcaaggtcaatcctcaattgatttagaaaccttgccactcgatgacgcc
gatgtatacacttcagtacttcaagaggccaaaaccagtgcggtatttcagctagaaagt
agcggcatgaaaaaatacttagcacagcttaagccctcaaatatcgaagatgtcattgcg
atgtgtgctttatatcgacccggcccgcttgagtctggtatggtgtctgattttatcgac
agaaagcatggtattcaagaagtggcttatccccatcctcagtttcagcatgaactgctg
caaccacctcttgaatcaacctatggggtcatcgtctatcaagagcaagtcatgcagatt
gcacaggtcttagcaggttataccttaggtggtgcagatatgctaaggcgtgccatgggc
aagaaaaaacccgaagagatggccaagcagcgtagtacttttgtggagggtgcgattgag
caaaatatcgatggcggtttggcggcacaaatttttgatttggttgaaaaatttgcaggc
tacggttttaataaatcacattcggcagcctatggtgtgcttgcttatcagactgcttac
ctaaaacattattatccagctgaatttatggcagcggtcttaacatctgaaatggatgat
accgaccaggtggtttttttactgtctgattgccgtgataattttgggttaactatcatc
ccacccagtgtcaatcatagccaatggaaatttgtggtcagagatgccaagacaattgtt
tatgggcttggtgctgtcaagggcgtcggtgaagaggcggttaatagcattgtcgctgca
cgcaaggacggtgcttttaaggatttatacgatttttgtaatcgtgttgacatcaaaaaa
gtgggtaaacgctcactagaagcactcattaaagcaggctgttttgatattttagccgaa
accttaaaaccacactatatcaccgatcactcagattgcagttaccaaattcgccgtggc
ttgtggcggcagctccccgaagcaatggcagctgccgaccaaaaccgccaaaaccaatta
attgggacgatggatttatttacagatgtcgatgattcactatttgtcgcaccgccactt
gaagatgtctactggcagccacaagatcgcttacgctatgaacaagcgacgcttgggctg
tatttaactggtcatcctttggatgaatatcgcagtgagctacccttatatactactgtt
aaaagtgtcgttgatttaaaagataccgccaaaggctttgcatggattgcaggcttgatt
tatgatgtggcattttttggggagcgtattgtcgtcaagcttgacgatggcaaaggtcgc
attgaaatgagctgctatggtgagacttttaatcaatttaaagaagttttgaccgcaggt
aagcgtgtgcttggtattgatgaagaatacaaaccgttatacaccaaaggtgagcgtgca
aatatgaccattgcaaatatcgtcatcgccaaaatcagcgtccgagaaaatgatgatggt
cggatttttactcgcctacatcacattgagtctatcgaaaatgctcggattcgccgacta
aaggaaattcatctaaagcttgcttgtgatgacactcaagcacttgaggggattttaagt
gtgataaaagaaaatagcccaccgcctgagctaatcaaacgaggctctcacccaacttca
gagcatgatgatatagacatcagtcaagtgggcgatttatgtgtacctttatcattatac
ttatatgatgaatgcagtgttgcacgcatccaaaccaatgaccgattacggctatacccc
agcgaccacaatattgctcaattaaaaaatcatatcactgatgatcatttggtgtttcga
taa
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integrated database retrieval system
