Moraxella catarrhalis 25239: MC25239_01601
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Entry
MC25239_01601 CDS
T03381
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcat
Moraxella catarrhalis 25239
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcat03032
]
MC25239_01601 (topA)
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_01601 (topA)
Enzymes [BR:
mcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MC25239_01601 (topA)
DNA replication proteins [BR:
mcat03032
]
Prokaryotic type
DNA Topoisomerases
MC25239_01601 (topA)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MC25239_01601 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_TFIIB
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AIT43984
LinkDB
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Position
complement(1722107..1724734)
Genome browser
AA seq
875 aa
AA seq
DB search
MATSKKTTTKAEAALTKANARGKSLVIVESPAKAKTINKYLGKDYVVRSSVGHVRDLPVG
GSATKTNKTQDVGLSREEKAQKALVRRMGVDPEHDWAAVYEILPNKTKVIRELKALAKEA
DKIYLATDLDREGEAIAWHLKEVIGGSDDKYSRVVFNEITKTAIQTAFEHPDQLNIDRVN
AQQARRFLDRVVGFMVSPLLWAKIARGLSAGRVQSVATRLVVEREREIRAFVPVEYWKIH
TNNTAAGETLNLEAVKKNGKTLKLGNKAQADEVVLALGSSDFIVSAIEEKPTQSRPSAPF
ITSTLQQAASTRLGFSVKKTMILAQRLYEAGHITYMRTDSTFLSQDALNLVREYITDHFG
DDYLPQKPNFYGNKQNAQEAHEAIRPSHVLVKSSQLTGMERDAQRLYELIWRQFVACQMM
PARYQSVNLMVAAGDIELKAKGRTLVFDGYTKVQPPAKTDDILLPAVKVGEKLPLIEILP
TQHFTSPPARYSEASLVKELESLGIGRPSTYASIISTIQERGYVKLENKRLYAEKMGDIV
TERLVESFPDLMDYAFTAGLEDKLDEVAVGEEDWKAVLDRFYHDFKQKLDYAKTTDGMRP
NNPTNVPDIHCDLCHRPMQIRTGSTGVFLGCTGYNLPPKERCKGTKNLMPVSAFEFDADD
DSAEVNALMEKKRCPKCNTAMDGYIVDGGLKLHICGNNPDCDGHVLEKGVFEIGGATSDT
PTIDCDKCDGQMELKTGRFGAYFACRKCDNTRKVLKNGQAAPPRMTPIDMPKLRSQKFDD
HYVLREGAAGLFLAASKFPKVRETRPPKLSELREIKDQLEPKFYYLFDAPDTDDVGNPTI
LRWSRKNQEQYVGSEKDGKATRFALVWRDGAWVQA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctaaaaaaacgaccaccaaagctgaggcagcattgaccaaagccaatgct
cggggcaaatccttagtgattgtggagtcgcctgccaaagccaaaaccattaataaatat
ttgggtaaagattatgtggtgcgttcaagcgtgggtcatgtgcgtgatctgcctgttggt
ggcagtgcgaccaaaaccaacaaaacccaagatgttggcttgtctcgtgaagaaaaagcc
caaaaagcattagttcgccgtatgggtgttgaccctgaacatgactgggcggcggtgtat
gagatattgccaaacaaaaccaaggtgattcgtgaactaaaagcacttgccaaggaggcc
gataaaatttatcttgccaccgatttagacagagagggtgaggcgattgcgtggcattta
aaagaagtgattggcggcagtgatgataaatacagccgtgtggtatttaatgaaattacc
aaaacagccatccaaacagcctttgagcatcctgatcaattaaacattgatcgtgtcaat
gcacagcaagctcgcagatttttggatcgtgtggtgggctttatggtatcaccactactt
tgggcaaagattgcccgaggtctgtcagcgggccgagtgcaaagtgtcgcaactcgtttg
gtggttgagcgtgagcgagaaattcgggcatttgtccctgttgaatattggaaaattcac
accaataacaccgcagcaggcgagacgctaaaccttgaagcggtcaaaaaaaatggtaaa
acgctaaaacttggcaataaagcacaagccgatgaagttgttttggcgttaggctcatca
gactttattgtgtcagcgatcgaagaaaagcccactcagtctcgtccatcagcacccttt
atcacttcaacgctccagcaagccgccagtacacgacttgggtttagtgtcaaaaaaacc
atgattttggcacagcgtttgtatgaagcagggcatattacttatatgcgtaccgactct
acttttttgagccaagacgccctaaatttggtgcgtgaatacattacagatcattttggt
gatgactatttgccccaaaaacccaatttttatggtaataaacaaaatgctcaagaggcg
catgaagcgattcggccttctcatgttttggtaaaatcctcgcagctgactggcatggag
cgtgatgctcagcgtctttatgagttgatttggcggcagtttgtggcatgccaaatgatg
ccagcacgctatcagtcagtcaatttgatggttgccgctggcgatatagagcttaaagcc
aaaggacggactttggtttttgatggctatacaaaggtgcagccgcctgctaagactgat
gatatcttactgcccgctgttaaagtgggtgaaaagttgcctttgattgagattttgcca
acacagcatttcaccagcccgcctgctcgctacagtgaagcaagcttagtcaaagagctt
gaaagcctcggtatcgggcgaccatcaacctatgcgtctattatctcaaccattcaagag
cgtggctatgttaagcttgaaaataaacgcctatatgctgaaaaaatgggagatattgta
acagaaaggttggtagaaagtttccctgatttgatggattatgcctttaccgcagggctt
gaagataagcttgatgaggtggcggttggcgaggaagattggaaagcggtgcttgacaga
ttttatcatgatttcaaacaaaagcttgattatgccaaaaccaccgatggcatgcgtcct
aataatccaaccaatgtgcctgatattcactgtgatttatgccatcgcccaatgcagata
cgcacaggttcaacgggtgtatttttgggttgtacaggttataatctaccacccaaagaa
cgctgtaaaggtaccaaaaatttgatgccagtttcggcatttgagtttgatgctgatgat
gattcagcagaggtcaacgccctcatggaaaaaaagcgttgcccaaaatgcaatactgcg
atggatggctacattgtcgacggtgggctaaagctgcatatctgtggtaataaccctgat
tgcgatggtcatgtgcttgaaaaaggtgtatttgagattgggggtgcaaccagtgataca
ccgaccattgattgtgataaatgcgatggtcaaatggagcttaaaacagggcgttttggt
gcatattttgcttgccgaaagtgtgataatacccgaaaagtactcaaaaatggtcaggcg
gcccctcctcgtatgacacccattgatatgcccaagctgcgttcacaaaaatttgatgac
cattatgtgctgcgtgaaggtgcagcagggctatttttggcggcatctaaatttcctaaa
gttcgtgaaactcgtccaccaaagctaagtgaacttcgtgagattaaagatcagcttgag
ccaaaattttattatttgtttgatgcaccagatacagatgatgttggtaacccaacaatt
ttacgatggagccgtaaaaatcaagagcaatatgttggttcagaaaaagacggtaaagcg
acccgtttcgccttggtttggcgtgatggtgcatgggtacaagcctag
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