Moraxella catarrhalis 25239: MC25239_01656
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Entry
MC25239_01656 CDS
T03381
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcat
Moraxella catarrhalis 25239
Pathway
mcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC25239_01656 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcat03021
]
MC25239_01656 (rho)
03019 Messenger RNA biogenesis [BR:
mcat03019
]
MC25239_01656 (rho)
Transcription machinery [BR:
mcat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MC25239_01656 (rho)
Messenger RNA biogenesis [BR:
mcat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MC25239_01656 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIT44032
UniProt:
A0A198UW69
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All DBs
Position
1782853..1784121
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKSKSVGELLAIAEHMGLDNMARSRKQDIIFAILKTHARNGEAIYGNGVLEILPD
GFGFLRSSEGSYLAGPDDIYVSPSQIRRFNLQTGDSIAGQIRPPKDSERYFALLKVSEIN
FDTPDRSRHKLIFENLTPLFPTQQLVLEAGNGTTEDLTGRIIDLIAPIGKGQRSIIVAPP
KAGKTVLLQTIAQAITKNHPECYLIVLLIDERPEEVTEMQRTVWGEVVASTFDEPPQRHI
QVAEMVIEKAKRLVEHKQDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNVEEGGSLTIISTALIDTGSKMDSVIFEEFKGTGNQEITLERELAERRIFPAINI
KKSSTRREERLLDEDTLRRVWILRKLMQPMEDAQATEFLLERLKDSKTNDEFFEQMVKKS
QN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgaattaaaaagtaaatccgttggcgagctgcttgctattgctgagcat
atgggtttggataatatggctcgcagtcgtaaacaagacattattttcgccattttaaag
acacatgctagaaatggtgaagcaatttatggcaatggcgtgcttgagattttacctgat
ggatttggttttttacgctcaagtgaaggttcatacttggcaggaccagacgatatttat
gtcagcccaagccaaatacgcagatttaatttgcaaacaggcgactccatcgcagggcag
atccgcccgcctaaagactcagaaagatattttgctctcttaaaggtgagtgaaattaac
tttgatacgcctgatcgtagtcgccacaagctgatttttgaaaatcttaccccacttttc
cccacccagcaactggtacttgaagcaggcaatggcacgaccgaggacttaacaggccgc
attattgatttgattgcacccattggtaaaggtcaacgctctatcatcgttgcaccgccc
aaagctggtaaaacggtactactacagaccatcgcccaagccatcaccaaaaatcatcct
gaatgctacttgatcgttctgctcattgatgaacgccccgaggaagtcaccgagatgcaa
cgcaccgtttggggagaagttgttgcctctacttttgatgaaccaccacaacgccatatc
caagtcgccgaaatggttatcgaaaaagccaagcgcttggttgagcataagcaagatgtg
gtgatcttacttgattctatcactcgcttggcgcgtgcttataatactgtcatcccatca
agcggcaaagtgctgacaggtggggtggatgctcatgcacttgagcgtcccaagcggttt
tttggagcggcacgaaatgtcgaagaaggcggcagcttgaccatcatttcaaccgctttg
attgacacaggttcaaagatggacagtgtcatttttgaggaattcaaaggcacaggcaac
caagagattaccttggagcgtgagcttgctgaacggcgtattttccctgccatcaatatc
aaaaaatccagtacacgccgagaagaacgcttgctagatgaagacacgctacgccgagtt
tggatacttcgtaagctcatgcaacccatggaagacgcccaagcaactgagtttttactt
gaacgcctaaaagactcaaaaaccaatgatgaattttttgagcaaatggtcaaaaaatct
caaaactaa
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