Methylomarinovum caldicuralii: MIT9_P0239
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Entry
MIT9_P0239 CDS
T09494
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau03420
Nucleotide excision repair
mcau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MIT9_P0239
03430 Mismatch repair
MIT9_P0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcau03400
]
MIT9_P0239
Enzymes [BR:
mcau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIT9_P0239
DNA repair and recombination proteins [BR:
mcau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIT9_P0239
MMR (mismatch excision repair)
Other MMR factors
MIT9_P0239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCX80665
UniProt:
A0AAU9BWT6
LinkDB
All DBs
Position
complement(228035..230185)
Genome browser
AA seq
716 aa
AA seq
DB search
MDITAILDPLNDAQREAVSAPLQPVLVLAGAGSGKTRVLVHRLAWLMEVEGMRPHALMVV
TFTNKAAREMRGRVEALLGIDTRGMWLGTFHGLAHRLLRRHAAEAGLPDGFQVLDSDDQY
RLIRRILREMKLDEGRWPPQQIQWYINAQKDEGRRPQHIVAGDLFERQMLDIYQEYERQC
QRAGLVDFGELLLRAHELLRDRPALLEHYRRRFGHVLVDEFQDTNTIQYAWLRLLTETRD
NLFVVGDDDQSIYGWRGARVENIRRFQADCPGHRLVRLEQNYRSTAHILDAANALIAHNS
GRLGKKLWTAGDRGEPISVYAAFNDLDEARFVVGRIQQWLESGRRGGEAAILYRSNAQSR
LFEEQLLAAGIPYRVYGGLRFFERAEIKSALAYLRLLASRDDDPSFERVVNLPTRGIGPR
TLDAVREHARNRGLSLWRAAESLCRSQDLPARARNALGKFLQLVDALDEATAALSLPDQV
RQVVEGTGLLAHYAREKGDQGEVRVENLKELVNAARQFALSHEDEELSPLDAFLANAALE
AGETQAGENEDSVQLMTLHAAKGLEFPLVFMVGMEEGLFPSLQSLEDAGRLEEERRLCYV
GMTRAMEKLYLTHAECRRLYGRETYPRESRFLREIPAEHLEQIRETARITRPAAVTPAAA
EASGLRLGQRVVHEAFGEGTVLQCEGQGKNARVQVNFDGAGVKWLMLAYANLEPAA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaccgcaatcctcgatcccctcaacgacgcccagcgcgaggccgtctccgcc
cccctgcagccggtgctggtgctggccggcgccggcagtggcaagacccgggtgctggtc
caccgtctggcctggctgatggaggtggagggcatgcgcccccacgccctgatggtggtc
accttcaccaacaaggcggcacgggagatgcgcggccgggtggaggccctgctgggcatc
gacacccgcggcatgtggctgggcaccttccacggcctcgcccaccgcctgctgcgccgc
cacgccgccgaggccggcttgcccgacggcttccaggtgctcgacagcgatgaccagtac
cgcctgatccgccgcatcctgcgggaaatgaaactggacgaaggccgctggccgccgcag
cagatccagtggtacatcaacgcccagaaggacgaaggtcgccgcccccagcatatcgtc
gccggcgacctgttcgagcgtcagatgctcgacatctaccaggaatacgagcgccagtgc
caacgcgccggtctggtggacttcggcgagctgctgctgcgggcccacgagctgctgcgc
gaccggccggcgctgctggaacactaccgccgccgcttcggccacgtgctggtggacgag
ttccaggacaccaacaccatccagtacgcctggctgcgccttctgaccgagacgcgcgac
aacctgttcgtggtcggcgacgacgaccagtccatctacggctggcgcggggctcgggtc
gagaacatccgccgcttccaggccgactgccccggccaccgtctggtgcggctggagcag
aactaccgttccaccgcccacattctcgacgccgccaacgccctcatcgcccataacagc
ggccgcttaggcaagaaactgtggaccgccggcgacaggggcgagccgatttcggtctat
gccgccttcaacgacctcgacgaggcccgtttcgtcgtcggccgcatccagcagtggctg
gaatccggccgccgcggcggcgaggcggcgatcctgtaccgttccaacgcccagtcgcgc
ctgttcgaagaacagctgctcgccgccggcatcccctaccgggtctatggcggcctgcgc
ttcttcgagcgcgccgagatcaagagcgccctggcctatctgcgcctgctcgccagccgc
gacgacgatccctccttcgaacgggtggtgaacctgcccacccgcggcatcggcccccgc
accctcgatgcggtgcgcgaacacgcccgcaaccggggcctctccctgtggcgggccgcc
gaatccctgtgccgttcccaggatctgccggcccgggcccgcaacgccctggggaaattc
ctgcagctggtcgatgccctcgacgaagccaccgccgcgctgtccctgccggatcaggtc
aggcaggtggtggagggaacaggactgctggcccactatgccagggaaaagggcgatcag
ggcgaggtccgggtggagaacctcaaggaactggtcaacgccgcccgccagttcgccctc
agccacgaggacgaggagctgtcgcccctggatgcgtttctcgccaacgccgccctcgag
gccggcgaaacccaggccggcgagaacgaggacagcgtccagctcatgaccctgcatgcg
gccaaggggctggaattccccctggtgttcatggttgggatggaggaggggctgtttccc
tccctgcagtcgctcgaggacgccggccgcctggaggaggagcgccgcctgtgttacgtc
ggcatgacccgggcgatggagaagctgtacctgacccacgctgaatgccgccgcctctac
ggccgcgagacctatccgcgcgaatcccgcttcctgcgcgagatccccgccgaacacctg
gagcagatccgcgaaaccgcccgcatcacccgtcctgcagccgtcaccccggccgctgcc
gaggcgagcggcctgcggctggggcagcgggtggtccatgaagccttcggcgaaggcacg
gtgctccagtgcgagggacagggcaaaaacgcccgggtgcaggtgaacttcgacggtgca
ggtgtcaagtggctgatgctggcgtatgctaacctggaaccggctgcctga
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