Methylomarinovum caldicuralii: MIT9_P0761
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Entry
MIT9_P0761 CDS
T09494
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mcau
Methylomarinovum caldicuralii
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcau03016
]
MIT9_P0761
Enzymes [BR:
mcau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MIT9_P0761
Transfer RNA biogenesis [BR:
mcau03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MIT9_P0761
Prokaryotic type
tRNA splicing ligases
MIT9_P0761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BCX81183
UniProt:
A0AAU9BQZ2
LinkDB
All DBs
Position
749540..750970
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AA seq
476 aa
AA seq
DB search
MDISKLERIDETCWRIPATGKMRVPVLIYADEDLIRDMDDKVAEQAGNVASLPGIVGACY
VMPDAHWGYGFPIGGVAAFDPAEGGVISAGGVGFDISCGVRTLTTGLKREEVEPLKKSLA
EALFIHIPAGVGSKGSISLNDAEMDAMLKGGATWAVKQGYGREEDLERIEEHGCMAGADP
AQVSKRARERQRREMGTLGSGNHYLEVQVVEEIFNPDVAKVFGLEADEVVVTIHCGSRGL
GHQIGSEYLKLMQKAAKEAGIELPDRELACAPIRSPVGQRYLGAMRAGINCALANRQIIT
HLVRKVFAEFFPDHDLKLIYDVSHNTCKEEEHEVGGKRRRVFVHRKGATRAFGPGHPALP
EAFRLVGQPVIIGGSMGTGSYILVGTTESERRSLSSACHGAGRCLSRRQATKTWKGQQVI
AELERQGIIVCSPSMRGVAEEAPQAYKPVDAVVRAADKAGLARLVARLRPLVCIKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagcaagctcgaacgcatcgacgaaacctgctggcgcattccggccaccggc
aagatgcgggtaccggtgctgatctatgccgacgaggatctgatccgcgacatggacgac
aaggtggccgagcaggccggcaacgtcgcttccctgcccggcatcgtcggggcctgttac
gtaatgcccgacgcccactggggctacggcttccccatcggcggggtggcggctttcgat
cccgccgagggcggggtgatttccgccggcggggtcggtttcgacatttcctgcggggtg
cgcaccctcaccaccggcctcaagcgcgaggaggtggaaccgctgaagaaatccctggcc
gaggcgctgttcatccacattcccgccggagtcggcagcaagggttcgatctccctgaac
gatgcggaaatggacgccatgctcaagggcggagcgacctgggcggtgaaacagggttac
ggccgcgaggaggacctggaacggatcgaggaacacggctgcatggccggtgccgacccg
gcccaggtgtcgaaaagggcccgcgagcgccagcgccgggagatgggcaccctcggctcc
ggcaatcactatctggaagtccaggtggtggaggagatcttcaacccggacgtggccaag
gtcttcggcctggaggcggacgaggtggtggtcaccatccactgcggctcccgcggcctc
ggccaccagatcggcagcgaatacctcaagctgatgcagaaggcggccaaggaggcggga
atcgaactgccggaccgggagctggcctgcgccccgatccgctccccggtagggcagcgt
tatctgggcgccatgcgcgccggaatcaactgcgcgctggccaaccgccagatcatcacc
cacctggtgcgcaaggtgttcgccgaattcttccccgaccacgatctcaagctcatttac
gacgtctcccacaacacctgcaaggaagaggaacacgaggttggcggcaagcggcggcgg
gtcttcgtccaccgcaagggggcgacgcgggccttcggccccggccatccggccctgccg
gaagcgttcaggctggtggggcagccggtcatcatcggcggctccatgggaaccggctcc
tacatcctggtgggcaccaccgagagcgaacgccgctccctgtcctcggcctgccacggc
gccgggcgctgcctgagccggcgccaggccaccaaaacctggaaagggcagcaggtcatc
gcggagctggagcgccaaggcatcatcgtctgcagtccgtcgatgcgcggggtcgccgag
gaggcgccgcaggcctacaagccggtggatgccgtggtgagggccgcggacaaggcggga
ctggccaggctggtggcgcggctgcggcccctggtctgcattaagggctag
DBGET
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