KEGG   Methylomarinovum caldicuralii: MIT9_P0820
Entry
MIT9_P0820        CDS       T09494                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mcau  Methylomarinovum caldicuralii
Pathway
mcau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MIT9_P0820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcau03400]
    MIT9_P0820
DNA repair and recombination proteins [BR:mcau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MIT9_P0820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MIT9_P0820
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 Kinesin UB2H PMT2_N DUF87 MIase Microtub_bd
Other DBs
NCBI-ProteinID: BCX81242
UniProt: A0AAU9BYT0
LinkDB
Position
complement(804850..806970)
AA seq 706 aa
MKSPEIGSRRSVYRKVLDRTREQSDNMIPDDARVLNPKTGRPFKLHSPYQPAGDQPEAIR
RLVAGLRHGELHQTLLGVTGSGKTFTMAHVIAEMQRPALILAPNKTLAAQLYGEMKQFFP
ENAVEYFVSYYDYYQPEAYLPASDTYIEKDASLNEHIEQMRLSATKALLERRDVVIVATV
SSIYGLGEPAAYFEMVLHLRRGDLIDQRSILRRLAEMQYTRNDTELRRGTFRVRGDVIDI
FPAESETEALRVELFDDEVERLSLFDPLTGEVLSPVARYTVYPKTHYVTPRQTLLRAVDA
IKAELQQRLEELRRDGKLVEAQRLEQRTRFDLEMILEVGYCSGIENYSRHLSGRKPGEPP
PTLFDYLPDDGIVFIDESHVTLPQLRAMYRGDRSRKETLVNYGFRLPSALDNRPLTLEEF
EARAPQRIYVSATPGPYEQEHSGAVVEQVVRPTGLVDPEVEVRPALTQVDDLLSEINRRA
AKNERVLVTTLTKRMAEDLTDYLMEHGVRVRYLHSDIDTVERVEIIQDLRKGEFDVLVGI
NLLREGLDMPEVSLVAILDADKEGFLRSTVSLIQTIGRAARNVHGKAILYADTVTEAMRR
AIEETERRRAKQIAYNEKHSITPKSAVRSLGDILELPVPGAGGRRSRKVAEQPGDYEALP
QSPKETARLIKQLEERMYRHARELEFEEAAKVRDRIAALKARLAAG
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaaatccccggaaatcggttcccgccgctcggtctatcgcaaggtgctggaccggacg
cgggagcaaagcgacaacatgatacccgatgacgcccgggtgctgaatcccaaaaccggc
aggcccttcaaactccacagcccctaccagcccgccggcgaccagcccgaggcgatccgc
cggctggtggcgggactgcgccacggcgagctgcaccagaccctgctgggggtgacgggt
tccggaaagaccttcaccatggcccacgtcatcgccgagatgcagcgcccggcgctgatc
ctggcccccaacaagaccctggcggcccagctctacggggagatgaagcagttcttcccg
gagaacgcggtggagtacttcgtctcctactacgactactaccagccggaggcgtatctg
ccggcctcggacacctacatcgagaaggacgcctccctcaacgaacacatcgagcagatg
cgcctgtcggccaccaaggcgctgctggagcggcgcgacgtggtcatcgtcgccaccgtg
tcctccatctacggcctgggcgagccggcggcctacttcgagatggtgctgcacctgcgc
cgcggcgacctcatcgaccagcgttcgatcctgcgccgtctggcggaaatgcagtacacc
cgcaatgacacggagcttcggcgcggcaccttccgggtccgcggcgacgtcatcgacatc
ttcccggccgagtccgaaaccgaggccctgcgggtggagctgttcgacgacgaggtcgag
cgcctgagcctgttcgatcccctgaccggcgaggtgctaagtccggtggcgcgctacacc
gtctatcccaagacccactacgtcaccccgcgccagaccctgctcagggccgtggacgcc
atcaaggccgaactgcagcagcgcctggaggaactgcgccgcgacggcaagctggtggag
gcccagcgcctggagcagcgcacccgcttcgacctggaaatgatcctggaggtgggctac
tgctccgggatcgagaactactcccgccacctgtccgggcgcaaaccgggcgaaccaccc
cccaccctgttcgactacctgcccgacgacggcatcgtcttcatcgacgaaagccacgtc
acccttccccagctgcgcgccatgtaccgcggcgaccgctcccgcaaggagaccctggtg
aactacggcttccgcctgccctcggccctggacaaccgccccctcaccctcgaggagttc
gaggcccgcgccccccagcgcatctacgtctccgccacccccggcccttacgagcaggaa
cattcgggcgccgtggtcgaacaggtggtgcgccccaccggcctggtggatccggaggtg
gaagtgcgcccggccctgacccaggtggacgacctgctgtcggagatcaaccggcgggcg
gcgaaaaacgagcgcgtcctggtcaccaccctcaccaagcgcatggccgaggatctgacc
gattacctgatggagcacggcgtgcgggtgcgctatctgcactcggacatcgacaccgtc
gagcgggtggagatcatccaggacctgcgcaagggggaattcgacgtgctggtgggcatc
aacctgctgcgtgagggcctggacatgccggaggtgtcgctggtggcgatcctggacgcc
gacaaggagggcttcctgcgctccaccgtgtccctgatccagaccatcggccgcgccgcc
cgcaacgtccacggcaaggccatcctctacgccgacaccgtcaccgaggccatgcgccgc
gccatcgaggagaccgagcgccgccgcgccaagcagattgcctacaacgaaaagcacagc
atcacccccaaaagcgcggtccgctccctgggcgacatcctggagctgccggtccccggc
gccggcggcagaagatcccgcaaggtggcggagcagccgggggactacgaggccctgccc
caatcccccaaggaaaccgcccgcctcatcaagcaactggaggaacggatgtaccgccac
gcccgggagctggagttcgaggaggcggccaaagtgcgcgaccgcatcgcggccctgaaa
gcccgcctggcggcaggctga

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