KEGG   Methylomarinovum caldicuralii: MIT9_P0940
Entry
MIT9_P0940        CDS       T09494                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mcau  Methylomarinovum caldicuralii
Pathway
mcau02020  Two-component system
mcau02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mcau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MIT9_P0940
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MIT9_P0940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcau03021]
    MIT9_P0940
Transcription machinery [BR:mcau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MIT9_P0940
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21
Other DBs
NCBI-ProteinID: BCX81362
LinkDB
Position
complement(923867..925300)
AA seq 477 aa
MKQSLQLRQGLQLRMTPQLQQAIRLLQLSSVELKQEIQEVLESNIMLELAEEEQAQVQTA
DQDRSAETPVTAAASDIPKELPLDAQWEDVYDNVYTTLNGADDPDHDFLLQRSAPEGLHE
HLEWQMELSRFSERDQLIAMALIDAINEEGYLEASLRDILQALENELPALEADEVEAVLH
RLQQFDPPGVAARSLGECLALQLHQLPEETPWRREALTVVTRHLRELEKQNIGALKKILG
LDEAQLDEVIALIRTLNPHPGLAYSTREPEYVIPDVFVFRRGGRWVVSVNPETAPKLRIN
PYYSGMIKRADKSPDNVSMRSHLQEARWFLRSLQSRSETLLKVAQCIVDRQQGFFEHGEI
AMKPMILRDVAGELGLHESTVSRVTTNKYMHTPRGIYEFKYFFSSHVGTEFGGEASATAI
KALIQELIQHENPAKPLSDLKIAKLLQEKGIHVARRTVAKYREALGIPASSRRKRLL
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaagcctgcaactgcgccaaggcctgcagctgaggatgacgccgcagctgcag
caggcgatccgtctgctgcaactctcctccgtggagctcaagcaggagattcaggaagtt
ctggagagcaacatcatgctcgagctggcggaagaggaacaggcgcaggttcagacggcg
gaccaagaccgcagcgccgaaaccccggtgaccgcggccgcctcggacatccccaaggaa
ctccccctggacgcccaatgggaggacgtctacgacaacgtctataccaccctgaacggc
gcggacgacccggaccacgatttcctgctccagcgcagcgcgcctgaagggctgcacgag
cacctggaatggcagatggagctgtcgcgcttcagcgaacgggaccagctcatcgccatg
gccctcatcgacgccatcaacgaagagggctacctcgaagcctccctgagggacattctc
caggcgctggagaacgaattgccggccctggaggcggacgaagtcgaggcagtgctgcac
cggcttcagcagttcgatcctcccggcgtcgccgcccgctccctgggggaatgcctggcg
ctccagctgcatcagctgccggaggagaccccctggcgccgggaagccttgacggtcgtc
acccgccacctgcgggaactggagaagcagaacatcggcgccctcaaaaaaatcctgggg
ctcgatgaggcgcagctggacgaggtcatcgccctgatccgcaccctcaacccccacccc
ggcctcgcctactccacccgggaaccggaatacgtcattcccgacgtcttcgtcttcaga
cgcggcgggcgctgggtggtttccgtcaacccggaaactgcccccaaactgcgcatcaat
ccctactattcaggcatgatcaaacgggccgacaaaagcccggacaacgtcagcatgcgc
tcccatctgcaggaggcgcgctggttcctgcgcagcctgcagagccgcagcgagaccctg
ctgaaggtggcgcagtgcatcgtcgaccgccaacagggatttttcgaacacggcgagatc
gccatgaagccgatgatcctgcgcgatgtcgccggggaactggggctgcacgaatcgacg
gtgtcgcgggtgaccaccaacaaatacatgcacacgccccgtggcatctacgaattcaag
tactttttctccagccacgtgggcaccgaattcggcggggaggcctcggccaccgcaatc
aaggccctgatccaggagctgatccaacacgagaatccggccaaacccttgagcgatctg
aagatcgccaagctgttgcaggaaaagggcatccacgtcgcccgccgcaccgtggccaag
taccgtgaggccctggggattcccgcctccagccggcgcaagcgcctgttatga

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