Methylomarinovum caldicuralii: MIT9_P0940
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Entry
MIT9_P0940 CDS
T09494
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau02020
Two-component system
mcau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MIT9_P0940
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MIT9_P0940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcau03021
]
MIT9_P0940
Transcription machinery [BR:
mcau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MIT9_P0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
Motif
Other DBs
NCBI-ProteinID:
BCX81362
LinkDB
All DBs
Position
complement(923867..925300)
Genome browser
AA seq
477 aa
AA seq
DB search
MKQSLQLRQGLQLRMTPQLQQAIRLLQLSSVELKQEIQEVLESNIMLELAEEEQAQVQTA
DQDRSAETPVTAAASDIPKELPLDAQWEDVYDNVYTTLNGADDPDHDFLLQRSAPEGLHE
HLEWQMELSRFSERDQLIAMALIDAINEEGYLEASLRDILQALENELPALEADEVEAVLH
RLQQFDPPGVAARSLGECLALQLHQLPEETPWRREALTVVTRHLRELEKQNIGALKKILG
LDEAQLDEVIALIRTLNPHPGLAYSTREPEYVIPDVFVFRRGGRWVVSVNPETAPKLRIN
PYYSGMIKRADKSPDNVSMRSHLQEARWFLRSLQSRSETLLKVAQCIVDRQQGFFEHGEI
AMKPMILRDVAGELGLHESTVSRVTTNKYMHTPRGIYEFKYFFSSHVGTEFGGEASATAI
KALIQELIQHENPAKPLSDLKIAKLLQEKGIHVARRTVAKYREALGIPASSRRKRLL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagcctgcaactgcgccaaggcctgcagctgaggatgacgccgcagctgcag
caggcgatccgtctgctgcaactctcctccgtggagctcaagcaggagattcaggaagtt
ctggagagcaacatcatgctcgagctggcggaagaggaacaggcgcaggttcagacggcg
gaccaagaccgcagcgccgaaaccccggtgaccgcggccgcctcggacatccccaaggaa
ctccccctggacgcccaatgggaggacgtctacgacaacgtctataccaccctgaacggc
gcggacgacccggaccacgatttcctgctccagcgcagcgcgcctgaagggctgcacgag
cacctggaatggcagatggagctgtcgcgcttcagcgaacgggaccagctcatcgccatg
gccctcatcgacgccatcaacgaagagggctacctcgaagcctccctgagggacattctc
caggcgctggagaacgaattgccggccctggaggcggacgaagtcgaggcagtgctgcac
cggcttcagcagttcgatcctcccggcgtcgccgcccgctccctgggggaatgcctggcg
ctccagctgcatcagctgccggaggagaccccctggcgccgggaagccttgacggtcgtc
acccgccacctgcgggaactggagaagcagaacatcggcgccctcaaaaaaatcctgggg
ctcgatgaggcgcagctggacgaggtcatcgccctgatccgcaccctcaacccccacccc
ggcctcgcctactccacccgggaaccggaatacgtcattcccgacgtcttcgtcttcaga
cgcggcgggcgctgggtggtttccgtcaacccggaaactgcccccaaactgcgcatcaat
ccctactattcaggcatgatcaaacgggccgacaaaagcccggacaacgtcagcatgcgc
tcccatctgcaggaggcgcgctggttcctgcgcagcctgcagagccgcagcgagaccctg
ctgaaggtggcgcagtgcatcgtcgaccgccaacagggatttttcgaacacggcgagatc
gccatgaagccgatgatcctgcgcgatgtcgccggggaactggggctgcacgaatcgacg
gtgtcgcgggtgaccaccaacaaatacatgcacacgccccgtggcatctacgaattcaag
tactttttctccagccacgtgggcaccgaattcggcggggaggcctcggccaccgcaatc
aaggccctgatccaggagctgatccaacacgagaatccggccaaacccttgagcgatctg
aagatcgccaagctgttgcaggaaaagggcatccacgtcgcccgccgcaccgtggccaag
taccgtgaggccctggggattcccgcctccagccggcgcaagcgcctgttatga
DBGET
integrated database retrieval system