Methylomarinovum caldicuralii: MIT9_P1023
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Entry
MIT9_P1023 CDS
T09494
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIT9_P1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcau03400
]
MIT9_P1023
Enzymes [BR:
mcau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MIT9_P1023
DNA repair and recombination proteins [BR:
mcau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIT9_P1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_22
Mmc1_C
Motif
Other DBs
NCBI-ProteinID:
BCX81445
UniProt:
A0AAU9BYQ5
LinkDB
All DBs
Position
1012440..1015850
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AA seq
1136 aa
AA seq
DB search
MQSLDLYGADFARGVHLIEASAGTGKTYSIAQLVARFVVAEGISVEEIGVVTFTKAATAE
LRQRIQQRLCQVRDALQGADPKDDALRQWLAGLEDPDQACRRVEAELLRLDLMPIQTIHS
FCQHALRQQALEAGELLGQALLEDDRPFNQAIVDDYWRQCLRQLTPAQWRAVLQRTASPD
RLLECIARWQPPVTFVPEVPWPEDAPVAVTPGAWQAFRGWMDDLCAKGCFNKPVRLWWAG
LRDEAKRPQQLGGAKLRADLAEFLEAHLSKRKVKPPRLTSLPDYAAHEPVLLALAELGRR
QTLLGVAWLQRAWRHWQEQYEKRLREQGLLTHDWVVRRLADVVAAAPIEALSRRFQVFLI
DEFQDTDRHQWRIFSSLFGAGRHWLFLIGDPKQSIYRFRGADLDTYFQAAAGATERWYLD
TNYRSHPDLVAAVNEVFADCDGADPERRPFYHPLLHYPEVKAGRSAADLALNREGGAPLV
WQAFEADGGGPYRYTNKDDTVAQLARHVAADVVELLQQARLVEKGRARRLRPGDIAVLVR
DNEEARIVRDALRDSRVPAVLIDRRSVFVTDTAEQLYRLLETLWEGVAWRRVKRVLADGW
FGLDAGGLTELERDEGAASAYLEAFAEAAARWREDSLLAALEALFRRFGVWEAIARRRDG
LRTLADLRHLLEMLQEEASRRQLGPQALLGWYRRRLDRPAGEAEQLRLESDDDAVELVTM
HSAKGLEYPVVLCFDLWAPESDSKHDPTVVGDASGSRVVFQIDGDAFAAAHQERLTAERQ
EALRIAYVALTRAKAGCWVYLLERENGPWSALRHLLTYRGEPDPFLEARRLAREFPRCFQ
YRRRPWRLDAAPRWRPQADRPRLVAPEPPARDLSAEALRLTSYSALVRGRDHGAVTDWLE
RLLEEGLAEPRQQLPRGVAFGNLLHWLLEKVPFRELAAGRIDPALWTAAQRWSGVGEMLE
PDEVLPLLQGAVTTPLPPFSLADVPPERRLHELEFFLPLRRLEAGPINRLLKGQPWYHPL
RFAPVSGFLRGFIDLVAECDGRFYVIDYKSNELAAYDEATLAEAMRSHDYGLQALLYALA
LHRYLKTRLRDYDYRRHFGGVRYLFLRGMDGTPGRGVYGFVPAPDWIDTLEAMLTP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcccttgatctctacggcgcggatttcgcgcgcggggtccatctgatcgaggct
tccgccggcaccggtaagacctattccatcgctcagctggtggcgcgcttcgtggtggcc
gaggggatcagcgtcgaggagatcggcgtggtcaccttcaccaaggcggcgacggcggaa
ctgcgtcagcgcatccagcagcgcctgtgccaggtgcgcgacgccctgcagggcgccgat
cccaaagacgacgccctgcggcagtggctggccggcctggaggaccccgatcaggcctgc
cgccgggtggaggcggagctgcttcgcctcgatctgatgccgatccagaccatccacagc
ttctgccagcacgccctgcgccagcaggccctggaggccggtgagctcctgggccaggcc
ctgctggaggacgaccgtcccttcaaccaggccatcgtcgatgactattggcgccagtgc
ctgcggcagctgacccccgcccagtggcgggccgtgcttcagcgcaccgcctcgccggac
cgactgctggaatgcatcgcccgctggcagccgcccgtgaccttcgtgccggaagtgccg
tggccggaggacgcgcccgtcgctgtcacccccggagcctggcaggcgttccgcggctgg
atggacgatctgtgcgcaaaaggctgtttcaacaagcctgtccggctgtggtgggccggg
ctgcgggacgaggcaaagcgcccgcagcagctgggcggggcgaagctgcgggccgatttg
gcggaatttctcgaagcccatctcagcaagcgcaaggtcaaaccgccgcggctgacgtcc
ctgccggattacgccgcccacgaaccggtgctcctagcgctggccgagctcggccgccgg
cagacgctgctgggcgtcgcctggctgcagcgggcctggcgccattggcaggaacaatac
gagaagcggctgcgtgaacaggggcttctgacccacgactgggtggtcaggcggctggcg
gatgtggtggcggcggcgcccatcgaggccctgagccggcgtttccaggtgttcctcatc
gacgagttccaggacaccgaccgccatcagtggcgcatcttctccagcctgttcggcgcc
ggccggcactggctgttcctgatcggcgatcccaagcagtccatctaccgctttcgcggc
gccgatctcgacacctatttccaggccgccgccggcgccaccgaacgctggtatctggac
accaactaccgctcccatcccgatctggtggcggcggtcaacgaggtgttcgccgactgc
gatggcgccgatccggaacgacgccccttctatcatccgctgctgcattaccctgaagtg
aaagccggacgcagcgccgcggatctggccctgaaccgggagggcggggcgccgttggtc
tggcaggcgttcgaggccgacggcggcggcccgtaccgctacaccaacaaggacgatacg
gtggcacagctggctcgccacgtcgccgccgacgtggtcgagctgctgcagcaggcccgc
ctggtggagaaaggccgcgcccgccggctgcgtcccggcgacatcgcggtgctggtgcgc
gacaacgaggaggcccgcatcgtccgtgacgccctgcgcgacagccgggtgccggcggtg
ttgatcgaccgccgctcggtgttcgtcaccgataccgccgaacagctctaccgtctcctg
gagacgctgtgggagggggtggcgtggcgccgggtcaagcgggtgctggcggacggctgg
ttcgggctggacgcaggcgggctgaccgagctggaacgggatgagggcgccgcctcggcc
tatctggaggccttcgccgaggcggcggcgcgctggcgcgaggacagcctgctggccgcc
ttagaggccttgttccggcgcttcggagtatgggaggccatcgcccgccggcgcgacggc
ctgcgtactctggcggatctgcgccacctgctggagatgctgcaggaagaggcctcacgg
cgccagctggggccccaggcgctgctggggtggtaccgccgccgtctcgaccgtcccgcc
ggcgaggccgagcagctgcgcctggagagcgacgacgacgcggtggagctggtcaccatg
cacagcgccaaggggttggagtatccggtggtgctgtgtttcgacctgtgggcgccggaa
agcgacagcaaacacgaccccaccgtggtcggcgacgccagcggcagccgggtggtgttc
cagatcgacggggacgccttcgccgccgcccatcaggagcgcctcaccgccgagcgccag
gaagccctgcgcatcgcctacgtggccctgacccgggccaaggcgggctgctgggtctac
ctgctggagcgggaaaacggtccctggtccgccctgcgccacctgctcacctaccgcggg
gaaccggatcccttccttgaggcccgccgcctggcccgcgaatttccccgctgtttccag
taccggcgccgtccctggcggctcgatgccgcgccgcgctggcgtccccaggcggaccgg
ccccggctggtggcgcctgaaccaccggcgcgcgacctgagcgccgaagccctgcgcctg
accagctactccgccctggtgcgggggcgggatcacggggccgtcaccgactggcttgaa
cgcctgctcgaggaggggctggccgaaccccgccagcagctgccccggggggtggccttc
ggcaacctgctgcactggctgctggaaaaggtgcccttccgggagctggcggccggcagg
atcgatccggccctgtggacggcggcgcagcgctggagcggggtgggggagatgctggaa
ccggatgaggtgctgccgctgctgcagggagcggtcaccaccccactgccgccgttcagc
ctggccgatgtgccgcccgaacgccggctgcacgagctggaattcttcctccccctccgg
cgtctggaggccggccccatcaaccgcctgctgaaaggtcagccttggtaccaccccctg
cgtttcgcccccgtcagcggttttctgcgcggtttcatcgatctggtggcggaatgcgac
ggccgtttctacgtgatcgactacaagtccaacgagctggcggcctacgacgaggcgacg
ctggcggaggcgatgcgcagccacgactacggtctccaggcgctgctctacgccctggcg
ctgcaccgttatctcaagacccggctgcgggactacgactaccgccgccacttcggcggg
gtgcgctacctgttcctgcgcggcatggacggcacgccgggaaggggagtgtacggattt
gtccccgcgccggattggatcgacaccctggaggcgatgctgacgccatga
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