Methylomarinovum caldicuralii: MIT9_P1032
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Entry
MIT9_P1032 CDS
T09494
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIT9_P1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcau03019
]
MIT9_P1032
03400 DNA repair and recombination proteins [BR:
mcau03400
]
MIT9_P1032
Enzymes [BR:
mcau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIT9_P1032
Messenger RNA biogenesis [BR:
mcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MIT9_P1032
DNA repair and recombination proteins [BR:
mcau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MIT9_P1032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
BTRD1
Motif
Other DBs
NCBI-ProteinID:
BCX81454
UniProt:
A0AAU9CAC9
LinkDB
All DBs
Position
1024360..1026165
Genome browser
AA seq
601 aa
AA seq
DB search
MTPEYLLQHVFGYQRFRGHQREIIDHVAGGGDALVLMPTGGGKSLCYQIPALLRAGTAVV
VSPLIALMQDQVDALEQLGVKAAFINSSLPWEEVRAREQRLLRGEYDLVYVAPERLCTDA
FLDKLARIPQALLAIDEAHCVSQWGHDFRPEYLQLAVLAERFPDVPRIALTATADAATRR
EILERLQLKEARVFAASFDRPNIRYRVAPKAAPRRQLLAFLEEHRGEAGIVYCLSRKRVE
DTARFLQQAGFAALPYHAGLAAETRAAHQQRFLHEEAVVMVATVAFGMGIDKPDVRFVAH
LDLPKSLEAYYQETGRAGRDGLAAEAWMLYGLQDVVMVRQLLAQSQADERIKRIEHHKLE
ALLGYCETTECRRQVLLRYFGEILAEPCGNCDTCLEPPAVWEATREARMALSCVYRTGQR
FGVKYLIDVLRGQADERIRRFGHDRVSTFGIGGHLSAAQWKSVFRQLTAAGYLAVDMAGH
GGLRLTEKCRPLLRGEEILRLRHDPQVRKTAAAKDRRAAGMPEDEDGKRLWAALRALRRQ
LAEAQQVPPYIIFSDATLADLVERRPRDPGDLLEVVGIGDAKRERYGQAILEVIRDHEVA
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaatacctcctccagcacgtcttcggttatcagcgattccgtggccaccag
cgcgagatcatcgaccacgtggccggcggcggcgacgcgctggtgctgatgcccaccggc
ggcggcaagtccctgtgctatcagattccggccctgttgcgcgccggcaccgcggtggtg
gtctcgcccctgatcgccctgatgcaggatcaggtcgacgccctggaacagctcggcgtc
aaggccgccttcatcaattccagcctgccgtgggaggaggtccgcgcgcgggaacagcgg
ctgctgcggggggaatacgatctggtctatgtcgcccccgagcggctttgcaccgacgcc
tttctggacaaactggcccgcattccccaggcgctgctggccatcgacgaggcccactgc
gtgtcccagtggggccacgatttccgtcccgagtacctgcagctggcggtgctggccgag
cgcttccccgacgtgccgcgcatcgccctgaccgccaccgccgacgccgccacccgccgc
gagatcctggaacgcctgcagctaaaggaagcgcgggtgttcgccgccagtttcgaccgt
cccaacatccgctatcgggtcgctcccaaggccgcgccgcgccggcaattgctggccttt
ctggaggagcaccgcggcgaggccggcatcgtctattgcctgtcgcgcaaacgggtcgag
gacaccgcccgtttcctgcaacaggcgggatttgcggcgctgccctaccatgccggcctg
gcggcggagacgcgggcggcccatcagcagcgtttcctccacgaggaggcagtggtcatg
gtggccacggtggccttcggcatgggcatcgacaagcccgacgtgcgtttcgtcgcccat
ctggacctgcccaagagcctggaagcctactaccaggaaaccggccgcgccgggcgcgac
gggctggcggcggaagcctggatgctctacggcctccaggacgtggtcatggtgcgccag
ctgctggcccagtcccaggccgacgagcgcatcaagcgcatcgagcaccacaagctcgag
gccctgctcggctactgcgaaaccaccgaatgccgccgtcaggtgctgctgcgctatttc
ggcgagatcctggccgaaccctgcggcaactgcgacacctgcctggagccgccggcggtc
tgggaggcgacccgcgaggcccgcatggccctgtcgtgcgtctaccgcaccggccagcgc
ttcggtgtcaagtacctcatcgacgtgctgcgggggcaggccgatgagcgtatccgccgg
ttcggtcacgaccgggtgtccaccttcggcatcggcggccatctcagcgccgcccagtgg
aagtcggtgttccgccagctcaccgccgccggttacctggccgtggacatggcggggcac
ggcggcctgcgcctgacggaaaagtgccgcccgctgctgcgtggggaggaaatcctgcgg
ctgcgccacgatccccaggtgcggaagaccgcggctgcgaaagaccgtcgtgcggccggg
atgccggaggacgaggacggcaaacggctgtgggcggcgctgcgggcgctgcgccggcaa
ctggcggaagcgcagcaggtgccgccctatatcatcttcagcgatgccaccctcgccgac
ctggtcgagcgccgcccccgggatcccggtgacctgctggaggtggtgggcatcggcgac
gccaagcgggaacggtacgggcaggccattctggaggtgatccgcgaccacgaggtggcg
gcatga
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