Methylomarinovum caldicuralii: MIT9_P1403
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Entry
MIT9_P1403 CDS
T09494
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIT9_P1403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcau03019
]
MIT9_P1403
03016 Transfer RNA biogenesis [BR:
mcau03016
]
MIT9_P1403
Enzymes [BR:
mcau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MIT9_P1403
Messenger RNA biogenesis [BR:
mcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MIT9_P1403
Transfer RNA biogenesis [BR:
mcau03016
]
Prokaryotic type
tRNA degradation factors
MIT9_P1403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
WHD_LYAR
S1_2
KH_2
KH_SLS1_2
KH-I_KHDC4-BBP
PCB_OB
OB_RRP5_4th
S1_RRP5
WHD_MCM3_C
Motif
Other DBs
NCBI-ProteinID:
BCX81823
UniProt:
A0AAU9C2J7
LinkDB
All DBs
Position
1412374..1414464
Genome browser
AA seq
696 aa
AA seq
DB search
MKPIRKEFQYGDRTVVMETGEIARQADGAVLVNMDGTVVLVTAVGSREAAPGTDFFPLTV
NYQEKAYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFHNEVQVIATVLSSN
PEVDGDIPALIGASAALAISGLPFHGPIGAARIGYKDGQYLLNPTLTQLDDSQLDLVVAG
TENAVLMVESEAKELPEDVMLGAVLYGHEQMQAVIGAIKELVEMVQPEPWEWHAPQPNPE
LEALVESHAKDALLVAYQIRPKKERSLKLKEIRKAVVEALTADERFEPAAVKEALEKLEK
KLVRARILQDQVRIDGRGLEDIRPIHIRTGVLPRTHGSALFTRGETQALVIATLGTGRDA
QLIDAIEGEYLESFMLHYNFPPFCVGEVGFVGSPKRREIGHGRLAKRAIQAVMPREEEFP
YVIRVVSEITESNGSSSMASVCGTSLALMDAGVPIKAPVAGIAMGLIKEGDGHAVLSDIM
GDEDHLGDMDFKVAGTADGVTALQMDIKIEGITPEIMGKAMEQAKRGRFHILDRMNQVLA
EPRAEMSDYAPRITSFRIDPSKIRDVIGKGGATIRSITDETGVSIDISDDGVVKIASVDK
QAGHEARRRIEEIVADVEVGKVYEGKVVRIMDFGAFVNILPGRDGLLHISQITEGRLENV
RDVLKEGDVVRVKVLEIDRQGRVRLSMKGVPQPKKH
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgattcgcaaagaattccagtacggtgaccgcaccgtcgtcatggaaaccggc
gagatcgcccgtcaggccgacggcgcggttctggtcaacatggacggcaccgtcgtcctg
gtgaccgcggtgggcagccgagaggcggcccccggcaccgatttcttccctctgaccgtc
aactatcaggaaaaagcctacgccgccggccgcatccccggcggctttttcaagcgtgaa
ggccggccttccgaaaaggaaaccctgacctcgcgcctcatcgaccggccgatccgcccc
ctgtttcccgacggcttccacaacgaggtccaggtcatcgccacggtgctgtcctccaat
cccgaggtggacggcgacatcccggccctgatcggcgcctcggcggccctggccatttcc
ggcctgccgttccacggacccatcggcgccgcccggatcggctacaaggacggccagtac
ctgctcaatcccaccctgacccagctggacgactcccagctcgatctggtggtggccggg
accgagaacgcggtgctgatggtggaatcggaagccaaggagctgccggaagacgtcatg
ctcggtgcggtcctctacggccacgagcagatgcaggcggtgatcggcgccatcaaggaa
ctggtggaaatggtccagcccgagccctgggagtggcatgccccgcagcccaaccccgag
ctcgaagccctggtggaatcccacgccaaggacgccctgctggtggcctaccagatccgt
cccaagaaggaacgctccctcaagctcaaggagatccgcaaggcggtggtcgaggcgctc
actgccgacgagcgtttcgagccggcggcggtcaaggaggccctggagaagctggagaag
aaactggtgcgcgcccgcatcctgcaggaccaggtccgtatcgacggccgcggcctggag
gacatccgcccgatccacatccgcaccggcgtgttgccccggacccacggttcagcgctg
ttcacccggggcgagacccaggccctggtgattgccaccctgggcaccggccgcgacgcc
cagctgatcgacgccatcgaaggggaatacttagagtccttcatgctccactacaacttc
ccgcccttctgcgtcggggaggtggggttcgtgggctcgcccaagcgccgtgagatcggc
cacggcaggctggccaagcgcgccatccaggcggtgatgcccagggaggaggaattcccc
tacgtgatccgggtggtgtcggagatcaccgagtccaacggctccagctccatggccagc
gtctgcggcaccagtctggcgctgatggacgccggagttcccatcaaggcaccggtggcc
ggtatcgccatgggcctgatcaaggaaggtgacgggcacgcggtgctgtccgacatcatg
ggcgacgaggatcacctcggcgacatggacttcaaggtcgccggcaccgccgacggcgtc
accgccctgcagatggatatcaagatcgagggcatcacccctgagatcatgggcaaggcc
atggagcaggccaagcgcggccgcttccacatcctcgacaggatgaaccaggtgctggcc
gagccgcgggcggagatgtccgactatgcccccaggatcacttcgttccgcatcgacccg
agcaagatccgcgacgtcatcggcaagggcggggccaccatccgcagcatcaccgacgaa
accggcgtcagcatcgatatcagcgacgacggggtggtcaagatcgcctcggtggacaag
caggccggccatgaggcccgccgccgcatcgaggagatcgtcgccgacgtcgaggtgggc
aaggtgtacgagggcaaggtggtccgcatcatggacttcggcgccttcgtcaacatcctg
ccgggacgcgacggcctgctgcacatttcccagatcaccgagggccggctggagaacgtc
cgcgacgtgctcaaggagggtgacgtggtccgggtcaaggtgctggaaatcgaccgtcag
ggccgggtgcgcctgtccatgaagggcgtgccgcagccgaagaagcactga
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