Methylomarinovum caldicuralii: MIT9_P1627
Help
Entry
MIT9_P1627 CDS
T09494
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcau
Methylomarinovum caldicuralii
Pathway
mcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIT9_P1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcau03021
]
MIT9_P1627
03019 Messenger RNA biogenesis [BR:
mcau03019
]
MIT9_P1627
Transcription machinery [BR:
mcau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MIT9_P1627
Messenger RNA biogenesis [BR:
mcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MIT9_P1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
Mor
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
BCX82045
UniProt:
A0AAU9C066
LinkDB
All DBs
Position
1639453..1640712
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKRKSAAELLEIAESLGIEGVSRSRKQDLIFAILKKVAKNGEDIYSEGVLEILQD
GFGFLRSPDASYLAGPDDIYVSPSQIRRFSLRTGDTVSGKIRPPKEGERYFAMLKVEKIN
FEPPENAKHKVDFSNLTPLFPQERFVLEIGNGSTEDLTARVIDLVAPIGKGQRGLIVSPP
KAGKTMILQNIAHSIAIKNPECYLIVLLIDERPEEVTEMTRSVRGEVVSSTFDEPPARHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKLLTGGVDANALEKPKRF
FGAARNIEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLERKIAEKRIYPAINI
NRSGTRREEFLVPPDELQKAWILRKILQPMDEIAAIEFLLDRLRKTKTNAEFFEAMKRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaccgaactgaaacgcaaatccgcggccgagttgctggaaatcgccgaatcc
ctcggaatcgagggggtttcccgcagccgcaagcaggatctgatcttcgccattctcaag
aaggtcgccaaaaacggcgaggacatctacagcgaaggggtgctggagatcctccaggac
ggcttcggcttcctgcgctcgcccgacgcttcctacctggcagggccggatgacatctac
gtctcccccagccagatccgccgcttcagcctgcgcaccggagacaccgtctccggcaag
atccgcccgccgaaggaaggcgaacgctatttcgccatgctcaaggtggagaagatcaac
ttcgagccaccggagaacgccaagcacaaggtggatttctccaacctgacgccgctgttc
ccccaggaacgcttcgtgctcgagatcggcaacggcagcaccgaagacctgaccgcccgg
gtcatcgacctggtcgcccccatcggcaagggccagcgcggcctgatcgtctcgccgccg
aaggcgggcaagaccatgatcctgcagaacatcgcccactccatcgccatcaagaacccg
gaatgctacctgatcgtgctgctgatcgacgagcgtccagaggaagtgacggagatgacc
cgcagcgtccgcggcgaggtggtgtcgagcaccttcgacgagccgccggcccgccacgtc
caggtggcggagatggtgatcgagaaggccaaacgcctggtggagcacaagcgcgacgtg
gtcatcctgctcgattccatcacccgcctggcacgggcctacaacaccgtggtgccctcc
tccggcaaactgctgaccggcggcgtggacgccaacgccctggaaaagcccaagcgcttc
ttcggcgccgcccgcaacatcgaggaaggcggcagcctcaccatcatcgccaccgcgctg
gtggaaaccggctcacgcatggacgatgtcatctacgaggaattcaagggcaccggcaac
atggagctgcacctggaacgcaagatcgccgaaaagcgcatctacccggccatcaacatc
aaccgttccggcacccgccgcgaggagttcctggtgcctccggacgaactgcagaaggcc
tggatcctgcgcaagatcctgcaaccgatggacgagatcgccgccatcgaattcctcctc
gaccgcctgcgcaagaccaagaccaacgcggagttcttcgaggcgatgaaacgggcctga
DBGET
integrated database retrieval system
