KEGG   Methylomarinovum caldicuralii: MIT9_P2001
Entry
MIT9_P2001        CDS       T09494                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mcau  Methylomarinovum caldicuralii
Pathway
mcau03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mcau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MIT9_P2001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcau03021]
    MIT9_P2001
   03400 DNA repair and recombination proteins [BR:mcau03400]
    MIT9_P2001
Enzymes [BR:mcau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MIT9_P2001
Transcription machinery [BR:mcau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MIT9_P2001
DNA repair and recombination proteins [BR:mcau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MIT9_P2001
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BCX82415
UniProt: A0AAU9CHE5
LinkDB
Position
complement(2038202..2038459)
AA seq 85 aa
MARITVEDCLDKVENRFELVLLATKRARQLLAGAEPLVPWGDDKATVVALREIAAGKLDI
DKLRELDMNGGVDPLLGSAPQPQTV
NT seq 258 nt   +upstreamnt  +downstreamnt
atggcccgaatcaccgtagaagactgcctcgacaaggtcgaaaaccgtttcgaactggtg
ctgctcgccaccaagcgggcccgccagctgctcgccggcgccgaacccctggttccctgg
ggtgacgacaaggccaccgtggtggccctgcgggaaatcgccgccggcaagctcgacatc
gacaagctgcgcgagctggacatgaacggcggtgtcgatccgctgctggggtcggcgccg
cagccgcaaacggtctag

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