Mycoplasmopsis caviae: NPA07_01420
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Entry
NPA07_01420 CDS
T08517
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcav
Mycoplasmopsis caviae
Pathway
mcav03030
DNA replication
mcav03430
Mismatch repair
mcav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPA07_01420 (dnaE)
03430 Mismatch repair
NPA07_01420 (dnaE)
03440 Homologous recombination
NPA07_01420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcav03032
]
NPA07_01420 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcav03400
]
NPA07_01420 (dnaE)
Enzymes [BR:
mcav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPA07_01420 (dnaE)
DNA replication proteins [BR:
mcav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NPA07_01420 (dnaE)
DNA repair and recombination proteins [BR:
mcav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NPA07_01420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
TPR1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
UUD35516
LinkDB
All DBs
Position
289178..292081
Genome browser
AA seq
967 aa
AA seq
DB search
MKKYVNLYNTTEYTFLDSLIKVDDLVRASKEKNLPAVVLSDHNNLFGLGAFMEACLKYDI
KGIIGVDLDVQEYRFIILAKNYVGFQKINQLIYKKSKGEIIEISELWNPNLIVLDHPRYG
YYAQTQDNKFLKAKNYYINSSDASLPNSILIKENKLFNSDDNETLNYLQKLANLEETKHY
SNYFDDVSVDEIIIERIYKIIDECNVVFPKKELHLAPYLNNDEQTNEELFVSLLKQGSKR
LASELSYYPQWNKRLEYEFNVIKKLGYINYFLIIQDLINWAKSQKIAIGPGRGSASGSLV
SYLLNITEINPLKYNLLFERFLNPERVSWPDIDIDIQDDRRQEVFDYLRNKYGSDKVALI
STFQTIGAKMAIRDMGRVMGISLIDINRISKTIKSDNLSDAYQNDLDFKIEMDNYPELYK
HALRIEGLPRQQSFHAAGFIIADDKLYNYVPLCQSNLENFQQVQVPMNYIESFGLLKIDL
LGLRTLSEIQLIEKSLEEEQKFDNLVKKDPQVLNDPSTMMMLNSGFTEGIFQLESPGMKK
TIQKVMLNSFDDLYAIISLFRPGPMEFITTYAENKKSNNLVRKIHPEYDKIVASTHGIIV
YQEQIMQIAQSIGGMSFSQADLLRKAISKKNQDEIKKYRGIFFENAYKTGISEKIINTIY
NNIEKFGLYGFNKSHAVSYAYLTMKMSYYKTRYTHLFYSSLITNAAGAQATINKYVNEIK
KLTFPVYSPNILYSSNKCEIRKEVIYLPFEMIKGFGAEGVNKIMADLEQNGPYKNNLIDT
MLRLRFAGIKDSAMETLIKANVFRDFGHTKHILQCDGQIKDIFKVLSSHSTYKEAISDIE
KMGYFNITFDEEIKRDIFYEMDNETALLGELYNAYSTSEYEAKYQNKLITITTSTPTKVA
VEVADLRKPRGKEFSILELRDSTTKLTFFVSNKTLANNFTLKKGQIIEATISFNRNKHIL
LGWKGIN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatgtcaatttatacaacacaactgagtacacttttctagattcacttatt
aaagttgatgatcttgttagggcatcaaaagaaaaaaatctacccgctgtagttttaagt
gaccacaacaatttgtttggccttggtgcctttatggaagcttgcttaaaatatgatatt
aaaggcattattggtgttgacttagatgtgcaggagtatcgatttataattttggctaaa
aattatgttggttttcaaaagataaaccaactaatttataaaaagagcaaaggtgaaatt
attgaaattagtgagctttgaaatcctaatttaattgtccttgatcatccaagatatggt
tactatgcacaaacgcaagataataaatttttaaaggctaaaaattattatattaattca
tccgatgcatcattgcctaattcaatattaattaaagaaaataaactttttaactctgat
gataatgaaacactaaattacttgcaaaagttagctaatttagaagaaacaaagcattat
tcaaactactttgatgatgttagtgttgatgagattataattgaacgtatttataaaata
attgatgagtgtaacgttgttttccctaaaaaagaacttcatcttgcaccatatttgaat
aacgatgaacaaactaatgaagaattgtttgtttcacttctaaaacaaggaagcaagcgt
cttgcaagtgagttaagttactatccacaatgaaacaagcgtcttgaatacgaatttaat
gttatcaaaaaattgggctatataaactactttttaattattcaagatttaattaattga
gctaagtctcaaaagattgcaataggacctggtcgtggtagtgcgtctggttcacttgtt
tcatatttgcttaatataacagaaattaatccgctaaaatataaccttctttttgaaaga
ttccttaatccagaaagagttagttgacctgatattgatattgatatccaagatgatcga
agacaagaagtttttgattatttaagaaataaatatggtagtgacaaagtggcccttatt
tctacttttcaaactattggtgctaaaatggctattagagatatgggccgtgtaatgggt
attagtttaattgacattaatcgtattagcaaaacaattaagagcgataatttaagtgat
gcatatcagaatgatttagattttaaaattgagatggataactatccagaactatataag
catgcactaaggatcgaaggtttgccacgacaacaaagttttcatgcggcaggttttatt
attgcagatgataaactttataattatgtgccactttgtcaaagcaatttagagaacttt
caacaagttcaagttccaatgaattatattgagagcttcggcttacttaaaattgactta
cttggactaagaacattaagcgaaatacaactaattgaaaaaagtttagaagaagagcaa
aaatttgacaatcttgttaaaaaagatccacaggttttaaatgatcctagtactatgatg
atgctcaattcaggttttactgaaggtatatttcaattagaatctcctgggatgaagaaa
acaattcagaaagtgatgcttaattcatttgatgatctttatgctattatttcgctattt
agaccagggccaatggaatttattactacatatgccgaaaataaaaagagcaataattta
gtaagaaaaattcaccctgaatatgacaaaattgtagcaagtactcatggtattattgtt
tatcaagaacaaattatgcaaatagctcaaagtatcggtggaatgagtttttctcaagct
gacttattacgtaaggcaattagcaaaaagaaccaagacgaaattaaaaaataccgaggt
atatttttcgaaaatgcctataaaacaggcattagcgaaaaaattattaatacaatttat
aataatattgaaaagtttggtttatatggctttaataaatctcatgctgttagttatgca
tatttaactatgaaaatgtcatattataaaacacgttatacacacttattttatagttcg
ctaataacaaatgcggctggtgctcaggcaactatcaataaatatgtaaatgagatcaaa
aagttaacttttccagtgtattcacctaacattttgtactcaagtaataaatgtgagatt
agaaaagaagtaatttatttgccttttgagatgattaaaggttttggtgctgaaggtgtt
aataaaataatggcagatttagaacaaaatggtccttataaaaataacttgattgacaca
atgttaagattacgctttgctggaattaaagactcagcaatggaaacactaattaaagcc
aatgtctttagagattttggccacactaaacatattcttcaatgtgatggtcaaattaaa
gatatttttaaggttttatcttcacatagcacttataaagaggcaatttctgacattgaa
aaaatgggatactttaatataacatttgatgaagagatcaagcgagatatattttacgaa
atggacaatgaaacagcccttttgggcgaattatacaatgcttatagtacaagcgaatat
gaggctaaatatcaaaataaattaataacaattacaacttcaacaccaacaaaagtggct
gttgaagttgcggatttaagaaaaccaagaggtaaggaattcagcatacttgaattaaga
gatagtacaacaaaattaacattttttgtaagcaataaaacacttgctaataatttcact
cttaaaaaaggtcaaataattgaagctacaattagttttaatagaaacaaacacattttg
cttggatggaagggaataaattaa
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