Mycoplasmopsis caviae: NPA07_04155
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Entry
NPA07_04155 CDS
T08517
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mcav
Mycoplasmopsis caviae
Pathway
mcav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NPA07_04155 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcav03400
]
NPA07_04155 (uvrB)
DNA repair and recombination proteins [BR:
mcav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NPA07_04155 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NPA07_04155 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA
AAA_22
AAA_30
AAA_7
DLH
Enkurin
Viral_helicase1
DUF7623
DUF6243
CSN7a_helixI
Motif
Other DBs
NCBI-ProteinID:
UUD34974
UniProt:
A0A3P8LIF8
LinkDB
All DBs
Position
complement(833897..835906)
Genome browser
AA seq
669 aa
AA seq
DB search
MSIYKLSSSYQPAGHQPQAISELVENIKANMKHQVLKGVTGSGKTFTIANVIKEFDRPVL
VLSHNKTLASQLYSELKGFFPHNNVEYYVSYFDYYRPEAYIPSSDTYIDKVSQGNKELDA
MRMSAMNSLMSRNDTIVVASVSAIYGALNPSEYYASVFVIEVGMQIKRDEFFKKLVQRNY
KRNQIDLELGSFSSKGDAVYIQPAHSDQYLIRIDFFGDEIDSITTCHPLTKEIIEHHKQY
TIFPGDAYTVDRSVINEACEKILEELEERIKYFESNNQLIEAQRIKERVEKDVDSLREFG
ICPGIENYARFMDRRKEGERPYTLLDYFSGKNPLLIIDESHMMIPQLNGMYAGDYSRKKN
LVDYGFRLPSALDNRPLKFSEFESQFNFQTIYISATPDDYELNKTYGLLTKLYVRPTGLL
DPKIEVRSSKNQVEDIFDELQKQKEKNERTLILTTTKRLSEELSRHYLERGQKIAYIHSE
HNTFERNEILRKLRKGVYDCVIGINLLREGVDLPEVSLIIVLDADKEGFMRSTKSLIQIS
GRAARNANGRVIFYGDKVTKSMQECIEDNEIKRAMQIAYNKEHNIVPKTISKPIPEPLVG
EGISGEIEFFFKNEKRNQSKSSKQAKEELIKKLREQMNQAAKELDYERAIELRDIILELQ
AGSNKVSNE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttataagttatcttcatcatatcaaccagcaggccaccaaccacaagccatt
agcgaactagttgaaaatattaaagcaaatatgaagcatcaagtacttaaaggggtaact
ggcagtggaaaaacctttactattgctaatgttatcaaggaatttgatcgccccgttcta
gttcttagccacaataaaacccttgcttcacaactctatagtgaacttaagggctttttt
ccgcacaataatgttgaatattatgtttcttattttgactactatcgccctgaagcttat
ataccatcctcagatacatatattgataaagtgtctcaaggtaataaggaattagatgca
atgcgaatgtcagcaatgaattcactaatgtcaagaaatgatactatagttgtagcatca
gtttctgctatttatggtgctcttaatccaagcgaatactatgcatctgtttttgttatt
gaagtagggatgcaaattaaaagagatgaattttttaaaaaactggttcaacgaaattat
aagcgtaatcaaattgatcttgaacttggttcatttagttcaaaaggtgatgccgtttat
attcaaccagctcacagtgatcaatatttaattcgcattgatttttttggcgatgaaatt
gactcaattactacttgtcatccattaactaaggagataattgagcaccataaacaatat
acaattttcccaggagatgcttatacagttgatcgtagtgttatcaatgaggcatgtgaa
aaaattttagaagaactcgaagagagaattaaatattttgaatcaaataatcaattaatt
gaagcacaaagaatcaaagagcgagttgaaaaggatgttgatagtttaagagaatttggt
atttgcccaggaattgaaaactatgctcgctttatggatagacgtaaagagggtgagcga
ccttatactttgttggactattttagtggcaaaaatccacttttgattattgatgaaagc
catatgatgattccacaattaaatggtatgtatgcaggggattattcacgaaaaaagaac
cttgttgactatggttttagacttcctagtgcactagataatcgacccctaaaatttagt
gagtttgaaagtcaatttaactttcaaacaatctatatttcagctacaccagacgattat
gaattaaacaaaacctatggattgttaactaaattatatgtacgtccaacggggttgctt
gatcctaaaattgaagtaagaagcagcaaaaatcaagttgaagatatttttgatgaactg
caaaaacaaaaagagaaaaatgagcgtacattaattttaacaacgacaaaaagactttca
gaagaattaagcagacactatttggaaagaggacaaaaaatagcttatattcactcagaa
cataacacttttgaacgtaatgaaattttaagaaaactgcgaaaaggcgtttatgattgt
gttattggaatcaacttattacgtgaaggtgttgacttacctgaagtaagtttaattata
gtgctggatgctgataaagaaggctttatgcgttcaacaaaaagtcttattcagattagt
ggtcgtgcagcacgtaacgctaacgggcgagttattttttacggtgataaagtaactaaa
agtatgcaagagtgtattgaagataatgagattaagcgtgctatgcaaatagcatataat
aaggagcacaatattgttcctaaaacaattagtaaaccaattccagagccactagttggc
gagggtattagtggtgaaattgaattcttttttaaaaatgagaaaagaaatcagtcaaaa
agtagcaaacaagccaaggaagaattgatcaaaaaactacgagaacaaatgaatcaagca
gcaaaagaacttgattatgagagagctattgaacttcgtgatattattcttgaattacaa
gcaggcagcaataaagttagcaatgaataa
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