Microbacterium caowuchunii: F6J84_00925
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Entry
F6J84_00925 CDS
T07216
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcaw
Microbacterium caowuchunii
Pathway
mcaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6J84_00925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaw03019
]
F6J84_00925 (recQ)
03400 DNA repair and recombination proteins [BR:
mcaw03400
]
F6J84_00925 (recQ)
Enzymes [BR:
mcaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F6J84_00925 (recQ)
Messenger RNA biogenesis [BR:
mcaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F6J84_00925 (recQ)
DNA repair and recombination proteins [BR:
mcaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F6J84_00925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QEV98822
UniProt:
A0A5J6KSD7
LinkDB
All DBs
Position
205926..207989
Genome browser
AA seq
687 aa
AA seq
DB search
MTRAPIDSPYGDLPLDDWAPPTDEDAPPPYDDGPPPYDDVPAGYDAMPDPGPAPRYAAPA
TDAGPLASGTAASADALPQHRDFTGADPLTVLKEVYGYDAFRGDQADIVAQVVGGGDAIV
LMPTGGGKSVTYQVPALVRPGTGLVVSPLIALMHDQVEALLANGVRAAFLNSTQSPAERA
AVERAYVVGDLDLLYVAPERLNLSSTAALLSRGRLSVIAIDEAHCVSQWGHDFRPDYLAL
GGLGEQFPGVPRMALTATATRATHREITERLGLGDAKHFVASFDRPNIQYRIEPKVDPRR
QLVSFIRSQQEGGSAGIVYALSRKSVEQTAEYLRTQGIDALAYHAGLPAEMRARHQSRFL
REDGVVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGEPSVVWMAYGLG
DVVQQRRMIDQSPGDRTYKMRLGQHLDAMLALCETVGCRRQNLLGYFGQQSDPCGNCDTC
LTPPETFDGLVPAQKLLSTVVRLQRERNQSFGAGQIIDILRGADTERIRQQRHNELATYG
IGADLSDQDWRSVVRQLLARGILVAKGDYGTLALGEPAAAVLRGDEQVPLRRDVMGRPAS
APRARRASASDTLAEGDRGLFEALREWRAQTAREQGVPAYIVFGDATLRALAEHRPAALA
DLDGISGIGAKKKDAYGEAVLEVIAAS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcgccgatcgactctccgtacggcgacctccccctcgacgattgggccccg
cccaccgacgaggacgcgccgccgccgtacgacgacggcccgccgccctacgacgacgtg
cccgcgggatacgacgcgatgccggatcccggccctgcgccccggtacgcggcaccggcg
acggatgcgggtccgctcgcctccggcacggccgcatccgccgatgcgctgccgcagcac
cgcgacttcaccggcgccgatccgctgaccgtcctcaaggaggtctacggctacgacgcc
ttccgcggcgaccaggccgatatcgtcgcccaggtcgtcggcggcggcgacgcgatcgtg
ctgatgccgaccggtgggggcaagagcgtcacctaccaggtcccggcgctggtgcgtccg
ggaaccgggctggtcgtcagcccgctcatcgccctcatgcacgaccaggtcgaggccctg
ctcgccaacggtgtccgtgccgcgttcctgaactccacccagagccccgccgaacgggcg
gcggtcgagcgggcctacgtcgtcggcgacctcgacctgctctacgtcgcgcccgagcgc
ctcaacctgagttcgaccgctgcgttgctctcccgggggcggctctccgtcatcgcgatc
gacgaggcccactgcgtgtcgcagtggggtcacgacttccggcccgactacctcgccctg
ggaggcctgggtgagcagttcccgggggtcccgcggatggcgctcaccgccacggcgacc
cgggcgacccaccgggagatcaccgagcggctcggcctcggcgatgccaagcacttcgtc
gcgagcttcgaccgtcccaacatccagtaccgcatcgaacccaaggtcgatccgcgccgt
cagctcgtgtcgttcatccggtcccagcaggagggcgggtcggcgggcatcgtctatgcc
ctcagccggaagagcgtggagcagaccgccgagtacctgcgcacgcaggggatcgacgcg
ctcgcctaccacgcgggtctgcccgcggagatgcgcgcccggcatcagtcccgtttcctc
cgtgaggacggtgtcgtcatggtcgcgacgatcgccttcggcatggggatcgacaagccg
gacgtgcgcttcgtcgcgcacatcgacctgccgaagtccgtcgaggggtactaccaggag
accggtcgcgccggccgcgacggcgagccgtcggtcgtctggatggcgtacgggctgggc
gacgtcgtccagcagcggcgcatgatcgatcagagcccgggggaccgcacgtacaagatg
cggctcggtcagcacctcgatgcgatgctcgccctgtgcgagaccgtgggatgccgtcgg
cagaaccttctcggctacttcgggcagcagtccgatccctgcggcaactgcgacacctgc
ctgacgccgcccgagaccttcgacgggctcgtccccgcgcagaagctactgtcgaccgtg
gtgcgcctgcagcgggagcgcaaccagtccttcggagccggccagatcatcgacatcctc
cgcggcgcggacaccgaacgcatccggcagcaacggcacaacgagctcgcgacctacggg
atcggtgccgacctcagcgaccaggactggcgcagtgtcgtccggcagctgctggcccgg
ggcatcctggtcgccaagggcgactacgggacgctggcgctcggcgagcccgccgcggcg
gtgctgcgcggagacgagcaggttccgctgcggcgcgacgtgatgggccgtcccgcgagc
gccccgcgggcgcggcgtgcgtccgcatccgacaccctcgccgagggtgaccgggggctg
ttcgaggccctccgcgagtggcgcgcccagaccgcacgcgagcagggtgtgccggcgtac
atcgtgttcggggacgccaccctgcgggcgctcgccgaacaccggcccgccgcgctggcc
gacctcgacgggatcagcggtatcggcgccaagaagaaggacgcgtacggcgaggccgtg
ctcgaggtcatcgccgcttcctga
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