Microbacterium caowuchunii: F6J84_02330
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Entry
F6J84_02330 CDS
T07216
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mcaw
Microbacterium caowuchunii
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcaw03016
]
F6J84_02330 (truA)
Enzymes [BR:
mcaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
F6J84_02330 (truA)
Transfer RNA biogenesis [BR:
mcaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F6J84_02330 (truA)
Prokaryotic type
F6J84_02330 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
QEV99068
LinkDB
All DBs
Position
508091..508930
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AA seq
279 aa
AA seq
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MRIRLDIAYDGTHFRGWARQPGLRTVQGTLETALARILAGNPSLVVAGRTDAGVHSTGQV
AHLDLDEAQRARLEQGRRTPADPVSALAGRVRGVLGAYPDVTVTRTSLAPEGFDARFSAV
WRRYTYRIADEVSGYDPLQRERTTSVRARLDVDAMDAAARSLIGLHDFAAYCKPREEATT
IRTLLEFDWHRAADGAVVANVRADAFCHSMVRALVGACVAVGEGRLDPSDVVALRDEGVR
TSAFKVLAARGLVLSEVGYPTDELLAARAEQTRARRTRE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccgcctcgacatcgcctacgacgggacgcatttccggggatgggcgcgccag
cccgggctgcgcacggtacagggcacgctcgagacggcgctggcccgcatcctggccggg
aaccccagcctggtggtcgccgggcggacggacgcgggggtgcattccaccggccaggtc
gcgcatctggacctcgatgaggcgcagcgcgcccgcctggagcagggcaggcgcacgccc
gcggatccggtctcggccctcgccggacgcgtccggggcgtgctgggcgcctaccccgac
gtcaccgtgacgcgcacgagtctcgccccagaagggttcgacgcgcgattctcggcggta
tggcgccgctacacctaccggatcgcggatgaggtcagcgggtacgacccgctccagcgg
gaacgcacgacgagcgtccgcgcacgactggacgtcgacgcgatggatgccgcggcccgc
tccctgatcggtctccatgacttcgcggcgtactgcaagccgcgggaggaggcgaccacc
atccggacgcttctggagttcgactggcaccgcgccgccgacggcgcggtggtcgcgaac
gtccgcgccgacgccttctgccacagcatggtccgcgcgctggtcggggcctgtgtcgcc
gtgggggaggggcgattggacccgtccgacgtggtggcgctccgggacgagggtgtgcgc
accagcgcgttcaaggtcctggccgcgcgcggactcgtgctctccgaggtcggatacccc
acggatgagctgctggccgcccgggcggagcagaccagagcgcgccgcactcgggagtga
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