Microbacterium caowuchunii: F6J84_08225
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Entry
F6J84_08225 CDS
T07216
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mcaw
Microbacterium caowuchunii
Brite
KEGG Orthology (KO) [BR:
mcaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaw03032
]
F6J84_08225
03400 DNA repair and recombination proteins [BR:
mcaw03400
]
F6J84_08225
Enzymes [BR:
mcaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F6J84_08225
DNA replication proteins [BR:
mcaw03032
]
Prokaryotic type
DNA Topoisomerases
F6J84_08225
DNA repair and recombination proteins [BR:
mcaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F6J84_08225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QEW00086
LinkDB
All DBs
Position
1730084..1732543
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AA seq
819 aa
AA seq
DB search
MPPTRAQSLPADEGRIEDIDVSTEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILFQM
AEMGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDALVRLAQDFALRVPLVDGHGNFGSL
DDGPAAARYTEARLAPAALALTENLDEDVVDFIPNYDGQFQQPEVLPAAFPSLLVNGTTG
IAVGMATNMAPHNLIEVVAAAIHLLDNPEATLEELMEFVPGPDLPGGGIIVGLDGVKDAY
ATGRGSFRTRAKVSIESLGPRRMGLVVTELPYMVGPERVIEKIKDAVGAKKLTGISDVSD
YTDRLHGLRLVIGIKTGFDPSAVLEQLYRLTPLEDSFGINNVALVNGQPQTLGLKELLRV
YLDHRIQVVTRRSRFRLARKQERLHLVEGLLIAIVDIDEVIQVIRASDDGEQARARLMDV
FDLSQLQAEYILELRLRRLTKFSRLDLETERDQLKAQIAELEELLSSEVRLRAQVARELD
AAAETYGTPRRTLLLNGGPVAPRSRSAAAAADLQIADAPCRVFLSATGRMVRAELTPDAP
NGGIVPPARRSKHDAIRSAVDTTTRGDLGAVTSLGRLVRFSPVDLPSVPGNSVQAAAGTR
ADQYLGLDKNEHVVALVPLTDNPPIALGTAHGVVKRVSAGELGTKHDVEIIGLRDGDRVV
GAAPATDGAELVFVTSDAQLLRFDAASVRPQGRAAGGMAGMRLSEGAEVITFTVVGPSVF
DAVVVTVAGSRGAIAGTDPGSAKVSPFSEFPAKGRATGGVRAQRFLKGEDTLTLAWIGTE
PRAVGADGAVRRLPEPGAKRDASGQPLEGVVTALGTAVR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccacccgcgcccagtccctgcccgccgacgagggccgcatcgaggacatcgat
gtgtccaccgagatgcagggatccttcctcgagtacgcctactcggtgatctactcgcgc
gccctcccggacgcgcgggacggtctgaagcccgtccagcggcgcatcctcttccagatg
gcggagatggggctacggcccgatcgcggccacgtcaagagcgcccgcgtggtgggcgag
gtgatgggaaagctccacccgcacggcgactccgccatctacgacgccctggtgcgtctg
gctcaggacttcgcgctgcgggttccgctcgtcgacgggcacggcaacttcggctcgctc
gacgacggtcccgcggcggcccggtacaccgaggcccggctcgcccccgcagccctcgcc
ctcaccgagaacctcgacgaggacgtcgtcgatttcatccccaactacgacggccagttc
cagcagcccgaggtgctgccggccgccttcccgagcctgctcgtcaacggcacgaccggg
atcgcggtggggatggccaccaacatggccccgcacaacctcatcgaggtcgtcgccgcc
gccatccatctcctcgacaacccggaagccacgctcgaggagctgatggagttcgtcccg
gggcccgatcttcccggcggcgggatcatcgtcggtctcgacggcgtcaaggacgcctac
gccaccggacggggaagcttccgcacacgcgccaaagtctccatcgagtcgctcggaccg
cggcggatgggtctggtcgtcacggaactgccgtacatggtgggtccggaacgggtcatc
gagaagatcaaggacgccgtcggcgcgaagaagctgaccggaatctccgacgtgtcggac
tacaccgaccgcctccacggtctgcgcctggtcatcgggatcaagaccggcttcgacccg
agcgccgtcctggagcagctctaccggttgactcccctcgaggactccttcggcatcaac
aacgtcgccctcgtcaacgggcagccgcagaccctcggcctgaaggaactgctgcgcgtc
tacctggaccaccgcatccaggtcgtcacccggcgcagccgattccggctcgcccgcaag
caggagcggctgcacctggtcgagggcctgctcatcgcgatcgtcgacatcgacgaggtc
atccaggtcatccgcgcctcggacgacggcgagcaggcgcgggcgcgcctcatggacgtc
ttcgacctctcccagttgcaggcggagtacatcctcgagctgcgtctgcgccgcctgacg
aagttctcccgcctggacctggagaccgagcgcgaccagctgaaggcgcagatcgccgag
ctggaggagctgctcagcagcgaggtccggctgcgtgctcaggtggcgcgcgagctcgac
gccgcggcggagacctacggcacgccgcgccgcacgctgctgctcaacggaggaccggtc
gctccccgatcccgctccgcggccgccgcggcggatctgcagatcgcggacgccccgtgc
cgggtgttcctctccgccaccggccggatggtgcgcgccgagctcaccccggacgccccg
aacggcgggatcgtcccgccggcccgccgcagcaagcacgatgccatccgttccgccgtc
gacacgaccacccgcggggatctcggcgcggtcacgagcctcggcagactcgtccgcttc
tcccccgtcgacctgccctcggtgcccggcaactcggtgcaggcggcggcgggtacccgg
gccgaccagtacctgggactggacaagaacgagcacgtcgtcgcgctcgtacccctcacc
gacaacccgcccatcgccctggggacggcgcacggagtggtcaagcgggtctccgcgggc
gagctcggcacgaagcacgacgtcgagatcatcggcctgcgcgacggcgaccgggtcgtc
ggggctgcgccggcgacggacggcgccgaactcgtcttcgtcacgagcgacgcgcagctg
ctgcgcttcgatgccgcttcggtccggccgcagggacgtgccgccggcgggatggcgggc
atgcgcctcagcgagggcgccgaggtcatcaccttcaccgtcgtcgggcccagcgtgttc
gacgccgtcgtggtgacggtggccggctcgcgcggggcgatcgcgggaaccgacccgggc
agtgcgaaggtgtcaccgttcagcgagttcccggccaagggccgcgcgacgggcggggtg
cgtgcgcagcgcttcctgaagggcgaggacacgctcaccctggcctggatcggcacggag
ccccgcgccgtgggcgcggacggcgccgtgcgccgtctcccggagccgggcgccaagcgg
gacgcgtccggtcagccgctcgagggcgtcgtgacggcgctcggcaccgccgtccgctga
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